Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00238 ATGAATTCGATTCTTGTAGTTGTAGGCTCCATTGTTTTAGCCTTCATTGTCTACAAGCTTCTTACCCGGAGAAGTGGCTCCACTGTTCCTCTGCCTCCCGGCCCCAGACCATGGCCTTTGATCGGAAACTTGCCCCACTTAGGCGCTATGCCTCACCAGTCCATCGCCGCTTTGGCTCGAGTTTACGGTCCTTTTATGCATCTGCGATTGGGACTTGTGGATGTCGTTGTGGCGGCGTCGGCGTCGGTGGCTTCTCAGTTTTTGAAAATCAACGACGCTAATTTTTCAAGCCGGCCGCCGAACTCCGGCGCGAAGCATATTGCTTACAATTATCAGGACCTCGTGTTTGCGCCTTACGGTCCAAGGTGGCGGATGCTACGGAAAATTACCTCCGTTCATGTGTTTTCCGGCAAGGCTTTAGATGATTTCAGACAAGTTCGCCAGGAAGAAGTGGCTGTGCTGGTTCGAGCCCTAGCAGGCGCAGGTTCGAAGGCAGCGAACCTGGGGCAATTGCTCAACGTCTGCACAGCGAACGCAATCGGCCGAGTGATGCTGGGTCGCCGCGTTTTCGGGGACAGAAACGGGAGCGTGGAAGGAGATCCGAAGGCGGAGGAGTTCAAATCGATGGTGGTGGAAGTGATGGTGCTGGCCGGGGTGTTCAACATCGGCGACTTCATTCCGGCGCTCGAGTGCCTGGATTTGCAAGGCGTGGCGAGCAAGATGAAGAAACTCCATAAGCGATTCGACGCTTTTCTGACTAACATCGTGGAGGAGCACAAGCTGATCGCCGACGGGGAGCAGCATACGGACATGCTGAGCACGTTGCTGTCGCTGAAGGAGGAGACGAACGAGGAAGGAGCCAAGCTGACGGACACAGAAATAAAAGCTCTGCTTCTGAACATGTTTGCGGCGGGGACGGACACGTCATCAAGCACGGTAGAGTGGGCCATAGCGGAGCTAATTAGGCACCCGAAAATCCTGGCCCAACTCCAAGACGAACTGGACTCAGTCGTCGGCCCAAATCGCCTGGTGTCCGAGCAGGACTTGCCCAAGCTCCCCTACCTCCAGGCCGTCATCAAAGAAACCTTCCGCCTCCATCCTTCTACTCCCCTCTCCCTCCCCCGCATTGCCGCCGAAAGCTGCCAGATCAACGGCTACCACGTCCCCAAGGGCGCCACTCTCCTAGTCAACGTGTGGGCCATTGCCCGCGACCCGGATGAGTGGCTCAACCCGCTCCAGTTCCGACCTGAGAGATTCTTGCCGGGTGGCGAAAAGGCCAACGTCGACCTTCGGGGGAATGACTTTGAGCTCATTCCCTTCGGCGCTGGACGGAGGATTTGCGCCGGGATGAGCCTTGGCATTCGCATGGTCCAACTACTCACGGCGACCTTGGTCCACGCTTTCAAATGGGAGCTGCCGGAGGGGGTGAAGCCAGATCAGCTTGACATGAACGAGGCGTATGGGCTGACCCTGCAGCGGGCGGATCCTTTGATGGTGCACCCTCGTCCGAGGCTATATCCCCAGGTTTACTAA 1533 56.75 MNSILVVVGSIVLAFIVYKLLTRRSGSTVPLPPGPRPWPLIGNLPHLGAMPHQSIAALARVYGPFMHLRLGLVDVVVAASASVASQFLKINDANFSSRPPNSGAKHIAYNYQDLVFAPYGPRWRMLRKITSVHVFSGKALDDFRQVRQEEVAVLVRALAGAGSKAANLGQLLNVCTANAIGRVMLGRRVFGDRNGSVEGDPKAEEFKSMVVEVMVLAGVFNIGDFIPALECLDLQGVASKMKKLHKRFDAFLTNIVEEHKLIADGEQHTDMLSTLLSLKEETNEEGAKLTDTEIKALLLNMFAAGTDTSSSTVEWAIAELIRHPKILAQLQDELDSVVGPNRLVSEQDLPKLPYLQAVIKETFRLHPSTPLSLPRIAAESCQINGYHVPKGATLLVNVWAIARDPDEWLNPLQFRPERFLPGGEKANVDLRGNDFELIPFGAGRRICAGMSLGIRMVQLLTATLVHAFKWELPEGVKPDQLDMNEAYGLTLQRADPLMVHPRPRLYPQVY 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2919290 2921153 + Bma027248.1 Bma08g00238 87065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00238 510 Gene3D Cytochrome P450 26 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00238 510 PANTHER FLAVONOID 3'-MONOOXYGENASE CYP75B4 8 503 - -
Bma08g00238 510 Pfam Cytochrome P450 32 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00238 510 PANTHER CYTOCHROME P450 71B11-RELATED 8 503 - -
Bma08g00238 510 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00238 510 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00238 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00238 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Bma08g00238 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00238 510 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00238 510 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00238 510 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00238 510 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00238 510 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00238 510 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00238 510 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00238 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00238 510 SUPERFAMILY Cytochrome P450 32 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00238 Bma-Chr8:2919290 Bma09g00984 Bma-Chr9:49367464 1.75E-151 dispersed
Bma14g00008 Bma-Chr14:104860 Bma08g00238 Bma-Chr8:2919290 2.15E-92 dispersed
Bma01g00126 Bma-Chr1:1238269 Bma08g00238 Bma-Chr8:2919290 6.31E-72 wgd
Bma12g01058 Bma-Chr12:42675774 Bma08g00238 Bma-Chr8:2919290 4.91E-104 wgd
Bma12g00971 Bma-Chr12:41712128 Bma08g00238 Bma-Chr8:2919290 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00238 K05280 - qsu:112039462 785.023