Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00244 AAAATTATCATGAATTCAAAGGAAAAAAGCTTAAAAGCAAGGGAAGAGGGAGAAACCACCACAAACGAGTGGAAATTACCCAAGTTGTCGGCAACGAGTTCAAAATCATGGTCGGGATCGAGAAATCCGAGGATTGTGCGAGTTTCTCGAACGTTTGGAGGGAAAGATAGACATAGTAAAGTTTGTACAATCCGAGGATTGAGAGATAGGAGGATTAGACTTTCAGTTCCAACTGCAATTCAACTATATGATCTTCAAGACAGACTTGGTGTTAATCAACCAAGCAAGGTAATCGATTGGTTGATTACCGTCACGAAGCTTGATATCGATAAGCTCCCTCCTCTCCAACTGCCTCCCGGATACGGTCAATTCGACCGAGAAATTTGGGCTTCTCAAGATCATTCAGGTTCGTATTTTACCCACAGGTGTGACACTTTCGTTACGTTGATGCACGAATCAAAACATTATCATCTCCTTGAATTCTAA 486 41.56 KIIMNSKEKSLKAREEGETTTNEWKLPKLSATSSKSWSGSRNPRIVRVSRTFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGVNQPSKVIDWLITVTKLDIDKLPPLQLPPGYGQFDREIWASQDHSGSYFTHRCDTFVTLMHESKHYHLLEF 161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3055317 3055802 + Bma027256.1 Bma08g00244 87071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00244 161 MobiDBLite consensus disorder prediction 7 22 - -
Bma08g00244 161 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 132 IPR005333 GO:0003700
Bma08g00244 161 Pfam TCP family transcription factor 54 117 IPR017887 -
Bma08g00244 161 MobiDBLite consensus disorder prediction 1 25 - -
Bma08g00244 161 PANTHER TRANSCRIPTION FACTOR TCP17 4 132 - -
Bma08g00244 161 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00019 Bma08g00244 CCT
Bma03g00857 Bma08g00244 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00857 Bma-Chr3:8234956 Bma08g00244 Bma-Chr8:3055317 1.82E-58 dispersed
Bma06g00019 Bma-Chr6:446399 Bma08g00244 Bma-Chr8:3055317 3.25E-55 dispersed
Bma08g00244 Bma-Chr8:3055317 Bma11g00905 Bma-Chr11:34981807 5.46E-28 dispersed
Bma01g01071 Bma-Chr1:11280842 Bma08g00244 Bma-Chr8:3055317 4.89E-41 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57725 PF03634 TCP 8.90E-25 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00244 - - gmx:100804574 179.489