Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00295 ATGATCCTAGTGAGTTGCATCATCGTAGCCCTCAGGCAACCTAACGATGATTCTGGAACCAGAACAACTGCAGGTAGCCCAGCCAGGGATTGCTACTCAACTGTCACCCGACCAAATACAAAAGATGCCAAAAAACCAATTGATCTTCTGACAGTGAATCCTGTTTCTTACACATCACCCAGACTAGGGTCTTCAAGTAATCATGTTCTAAATCTACAAGTTCCATGTCATGGGGTTTTCAGTGCTCCAGACAGTTACATGTCAAGTCCCGTCAGAAGTCCCATGAGAGCATTTAACACTGAGCAAGTCATTAACACTGCTTTCTGGTCTGGGAAGGATTGTCCTGATATCACTTTTACTGGCTCCGGCAATTGCTCTAGTCCTGGTTCTGGTTACAATTCTGGGCATAATTCAATGGGAGGCGATCTTTCAGGCCAGATATTCTGGCAGCATAGCAGAGGTAGTCCTGAATATTCTCCAGTTCCTAGTCCTAAAATGGCAAGCCCTGGTCCTAGCTCAAGAATTCATAGTGGTGCTGTCACACCTATTCATTCCGGAGCAGGGGGAACTCCCCATGAGTCACAGACAAGCTGTTCTGATGGGAAACGAAGTCACCGTTTACCACTTCCTCCTATAATAATCTCAAACCCTCCCTTTTCTCAGTCAAATTCAGCTGCAACTTCTCCCTCTATGCCAAGAAGTCCAGGTAAGGGAGAGACTCCGGCTAGCCCTGGTCCACGCTGGAAAAAGGGAAAGCTTCTGGGTAGGGGAACATTTGGACATGTTTACGTTGGGTTTAACAGTGAAAGTGGCGAAATGTGTGCAATGAAAGAGGTCATGTTATTTTCAGATGATGCAAAATCTAAAGAAAGCGCGAAGCAATTGATGCAGGAAATTGCTTTGTTGAGCCGTTTAAGACATCCCAACATCGTGCAGTACTATGGATCTGAAGTGGTGGGTGACAAGCTATATATATACTTGGAGTATGTATCTGGTGGCTCTATCCATAAGCTTCTTCAAGAATATGGACAGTTTGGTGAACTGGCAATTCGTACTTATACTCAACAAATTTTGTCTGGCCTTGCATATTTACATTCTAAAAATACTGTACATAGAGATATCAAAGGAGCAAATATACTAGTTGATCCAAATGGCCGAGTCAAATTGGCAGACTTTGGGATGGCAAAGCATATTACTGGGCAATCATATCCATTGTCATTCAAGGGCTAG 1230 43.98 MILVSCIIVALRQPNDDSGTRTTAGSPARDCYSTVTRPNTKDAKKPIDLLTVNPVSYTSPRLGSSSNHVLNLQVPCHGVFSAPDSYMSSPVRSPMRAFNTEQVINTAFWSGKDCPDITFTGSGNCSSPGSGYNSGHNSMGGDLSGQIFWQHSRGSPEYSPVPSPKMASPGPSSRIHSGAVTPIHSGAGGTPHESQTSCSDGKRSHRLPLPPIIISNPPFSQSNSAATSPSMPRSPGKGETPASPGPRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVMLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSEVVGDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRTYTQQILSGLAYLHSKNTVHRDIKGANILVDPNGRVKLADFGMAKHITGQSYPLSFKG 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4102153 4104845 + Bma027317.2 Bma08g00295 87122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00295 409 MobiDBLite consensus disorder prediction 216 234 - -
Bma08g00295 409 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 17 409 - -
Bma08g00295 409 SMART serkin_6 248 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00295 409 ProSiteProfiles Protein kinase domain profile. 248 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00295 409 MobiDBLite consensus disorder prediction 152 251 - -
Bma08g00295 409 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 17 409 - -
Bma08g00295 409 Gene3D Transferase(Phosphotransferase) domain 1 247 408 - -
Bma08g00295 409 ProSitePatterns Protein kinases ATP-binding region signature. 254 277 IPR017441 GO:0005524
Bma08g00295 409 Pfam Protein kinase domain 249 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00295 409 SUPERFAMILY Protein kinase-like (PK-like) 241 401 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00295 Bma-Chr8:4102153 Bma14g02057 Bma-Chr14:43912303 1.59E-08 dispersed
Bma08g00295 Bma-Chr8:4102153 Bma01g02638 Bma-Chr1:83891178 9.86E-45 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66656 PF00069 Pkinase 3.00E-44 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00295 K20717 - gmx:100792783 600.512