Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00312 ATGGCTATCCTCCTGGTTCTACTTTCCGGCCTCCTTTGTGCCCGTATCTCAGCCCTTTCCGCCGGCTTCGTTCCGGTAGATAATTTCCTCATTGATTGTGGTGCAGAGACCTTAGCCACCCTGCCCGACGGCAGAATTTTCAAGACAGATGAGCAATCCAGGCAGTTTCTAAATGCCAACGACGATATCAAAGCCTCCGCCCCTTCCGATAATCTGCCTTCGTCTTTATACGTAACGGCGAGGATCTTTTTCCAAGAAGCCACTTACGCATTTCAGTTGGCGGAGCCTGGATGGCATTGGATTCGCCTCCATTTCTACCCCGTTAAGAGCGCCAGTTTCGATTTGGTTCGGGCGAAGTTCACCGTCACCACCGATAAGTACGTTTTGCTGCATAGCTTCAACATTAAGAACGCCACCCAATACGTTCTCAAGGAGTTCCTCATCAACGTCACCGATCCAAAACTCTCGATCAAATTCTCTCCGATGAAGAACTCCGCCGCTTTCATCAACGCCGTCGAGGTGGTTTCGGCTCCCGACGGCTTGATCGAGGACACCAGTGCGGTTCTTTCCCCGGTTGGTCAATATCACGGCCTATCCAGCCATGGTTTCCAGACCCTTTACAGGATCAATATGGGAGGTCCGCTAATCACCTCCAGAAACGACTCTCTCGGACGGATATGGCTGCCGGACGAACCTTATATTAAGGCCAAAAATTTCGGACGAAGTGTCACTGTTCAGACCAGTACCATCAAGTATCAGGAAGGACAGGAACAGCTAGGGGCGTTGATTGCGCCTCAAAGTGTCTATGCAAGTGCAATTCGAATGGCCGATGCCGTTGTAGATCTACCAAACTTCAACGTCACGTGGAATTTCGAGGCCGATCCTTCATTCGCATATCTAGTTCGGCTCCATTTTTGCGACATTGTGAGCAAATCACTAAACGATCTCTACTTCGACGTTTATATCAACGGGAATGCGGCAATTACAGACTTGGATTTGTCGCACACGTTGGGAGGCCTGTCGATCGCATACTACACGGACATTCTCGTCAATGCTTCGTCGGTTTCCAATGGAGTTCTCACAGTTCAGATCGGACCGTCCAAGCTCAGCACCGGCGACGTCAATGCCATTTTGAACGGTCTTGAAGTCTTAAAAATGAGCAACTCGGTGGATAGTTTAGATGGAGAGTTTGGCGTCGATGGGAAATCTGCCGCCGGTTCCAACCGTGGGACAGTGGCGGCGGTTGGGTTTGCGATGATGTTCGGAGCCTTCGTCGGGCTTGGAGCTATGGTGATCAAATGGCACAAGAGGCCACAAGATTGGCAGAAGAGAAACAGCTTTTCTTCATGGCTGCTTCCCGTCCATGCAGGCGATACGAGCTTTATGACGAGCAAAAGCTCGTACGGATCGCACAAAACAAATATTTACTCGTCGACTCTAGGACTCGGAAGGTTCTTTTCGTTTGCAGAGTTGCAGGAAGCGACCAAGAACTTTGACTCCAACGAAATCATCGGCGTCGGAGGATTCGGTAACGTCTATCTCGGAGTGATCGACGAGGGGACTAAAGTTGCAGTCAAGCGAGGAAATCCTCAGTCGGAGCAAGGAATTACCGAATTCGAGACCGAAATTCAGATGCTCTCGAAGCTCAGACATCGGCATTTGGTTTCTCTGATCGGCTACTGCGACGAGAACTCAGAAATGATCTTAGTTTATGAGTATATGTCTAATGGACCTTTCAGAGACCATTTGTACGGAAAGGACTTGCCCCCACTTTCATGGAAGCAGAGACTGGAAATCTGCATCGGGGCGGCGCGTGGGCTCCACTACCTTCACACCGGCACGGCACAAGGCATCATTCACCGAGACGTAAAGACGACGAACATCTTGCTCGACGATAACTTCACCGCCAAGGTCGCCGATTTTGGGCTGTCGAAGGATACACCGATGGGGCAAGGCCACGTAAGCACTGCCGTGAAGGGAAGCTTTGGATACTTGGATCCGGAGTATTTCCGGCGGCAGCAGTTGACAGACAAATCAGATGTTTACTCATTTGGGGTGGTTCTGCTCGAGGTGCTTTGTGTCCGGCCGGCGATTAACCCGTCTTTGCCGAGGGAACAAGTGAATTTGGCTGATTGGGCTATGCAGTGGAAGAGGAAGGGTCTGTTGGATAAAATAATGGATCCTTTTCTTGTCGGCGCTATCAATCCTGAATCCATGAAGAAGTTTGCAGAAGCTGCAGAGAAGTGTTTGGCTGAATATGGAGTTGACAGACCCACCATGGGAGATGTGCTGTGGAATTTGGAGTATGCTTTGCAGCTTCAAGAGGCTTTCACGCAGGGCCAAACGGAGGACGAGAGCAAGTCCTCTGCAACAATTTCAGTTCCCGGCGGTGATTCTACAGTGGAGAATCCTCCCGTTTCTTCTACACCGGAAGAGAACAAGGCTTCTTCTTCTACTCCAGAAGAGAACAAGGCTTCTGAGGTTCAAGCCATTAATGAACACTCTGGAACTGCAATGTTTGCGCAGTTTGCTAATCTCAGCGGTCGGTAA 2550 50.16 MAILLVLLSGLLCARISALSAGFVPVDNFLIDCGAETLATLPDGRIFKTDEQSRQFLNANDDIKASAPSDNLPSSLYVTARIFFQEATYAFQLAEPGWHWIRLHFYPVKSASFDLVRAKFTVTTDKYVLLHSFNIKNATQYVLKEFLINVTDPKLSIKFSPMKNSAAFINAVEVVSAPDGLIEDTSAVLSPVGQYHGLSSHGFQTLYRINMGGPLITSRNDSLGRIWLPDEPYIKAKNFGRSVTVQTSTIKYQEGQEQLGALIAPQSVYASAIRMADAVVDLPNFNVTWNFEADPSFAYLVRLHFCDIVSKSLNDLYFDVYINGNAAITDLDLSHTLGGLSIAYYTDILVNASSVSNGVLTVQIGPSKLSTGDVNAILNGLEVLKMSNSVDSLDGEFGVDGKSAAGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPVHAGDTSFMTSKSSYGSHKTNIYSSTLGLGRFFSFAELQEATKNFDSNEIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFETEIQMLSKLRHRHLVSLIGYCDENSEMILVYEYMSNGPFRDHLYGKDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDDNFTAKVADFGLSKDTPMGQGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEVLCVRPAINPSLPREQVNLADWAMQWKRKGLLDKIMDPFLVGAINPESMKKFAEAAEKCLAEYGVDRPTMGDVLWNLEYALQLQEAFTQGQTEDESKSSATISVPGGDSTVENPPVSSTPEENKASSSTPEENKASEVQAINEHSGTAMFAQFANLSGR 849
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4637473 4640022 - Bma027339.1 Bma08g00312 87139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00312 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Bma08g00312 849 Pfam Protein tyrosine and serine/threonine kinase 501 696 IPR001245 GO:0004672|GO:0006468
Bma08g00312 849 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Bma08g00312 849 ProSiteProfiles Protein kinase domain profile. 498 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00312 849 Gene3D Transferase(Phosphotransferase) domain 1 574 794 - -
Bma08g00312 849 CDD STKc_IRAK 504 768 - -
Bma08g00312 849 Gene3D - 28 178 - -
Bma08g00312 849 Gene3D - 203 388 - -
Bma08g00312 849 SMART serkin_6 498 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00312 849 MobiDBLite consensus disorder prediction 778 834 - -
Bma08g00312 849 SUPERFAMILY Protein kinase-like (PK-like) 482 765 IPR011009 -
Bma08g00312 849 PANTHER OS07G0166700 PROTEIN 15 829 IPR045272 GO:0004714|GO:0006468
Bma08g00312 849 Pfam Malectin-like domain 31 385 IPR024788 -
Bma08g00312 849 PANTHER BNAC03G60370D PROTEIN 15 829 - -
Bma08g00312 849 Gene3D Phosphorylase Kinase; domain 1 459 573 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00312 Bma-Chr8:4637473 Bma14g00283 Bma-Chr14:3579446 0 dispersed
Bma08g00228 Bma-Chr8:2796119 Bma08g00312 Bma-Chr8:4637473 0 transposed
Bma09g00183 Bma-Chr9:7050748 Bma08g00312 Bma-Chr8:4637473 1.68E-58 transposed
Bma10g00250 Bma-Chr10:2304299 Bma08g00312 Bma-Chr8:4637473 1.02E-49 transposed
Bma03g00562 Bma-Chr3:4676900 Bma08g00312 Bma-Chr8:4637473 0 wgd
Bma08g00312 Bma-Chr8:4637473 Bma08g00788 Bma-Chr8:45273024 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66657 PF12819 Malectin_like 7.60E-40 CL0202 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00312 - - jre:108986963 1315.83