Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00488 ATGGCAGCGAGTCCAATAACAGAAGTTGAGCCACACAAATCGCCCAGTCCTCCCATGGACGTGGAGGCGCAACAACCTGACCCATCGAAAGAAATGGTCGAGGATTTTGACTACTCGAAGAGAGCACAGTGGCTTCGAGCGGCTGTGCTTGGCGCCAACGATGGCCTGCTCTCTGTGGCAAGCCTGATGATGGGCATTGGCGCCATTCACGAGGACTCTAAGACCATGTTGCTTACAGGCGTTGCCGGGCTGGTTGGTGGAGCTTCAAGCATGGCCATTGGAGAGTTCGGGTCTGTCTACTCACAGCGTGACATTGAAGTTGCCCAAATTAAGAGAGCTGGGATTGGGAAGGTAGAGAGTGAGAAGGACAGAGAGAAATTGCCCAACCCTTTCCATGCAGCTGCGGCCTCGGCGTCTGCGTTCTCAGTGGGGGCAACTGTGCCACTGCTTGCGGCGTCTTTCGTGCGTGTTTTCTGGATGAGGGTGGTGGTCGTGGCGGTTGTTGTGAGCTTGGCTTTAATGGCTTTTGGATGGGTGGGGGCGTTGCTGGGGAAGGCGCCTGTGCTCAAGTCGAGTGGGAGAATTTTGGTTGGTGGGTGGTTGGCCATGGCCATCACCTACGGCTTAACAAAGCTTCTTGGTCATTCTGGACTATGA 657 55.1 MAASPITEVEPHKSPSPPMDVEAQQPDPSKEMVEDFDYSKRAQWLRAAVLGANDGLLSVASLMMGIGAIHEDSKTMLLTGVAGLVGGASSMAIGEFGSVYSQRDIEVAQIKRAGIGKVESEKDREKLPNPFHAAAASASAFSVGATVPLLAASFVRVFWMRVVVVAVVVSLALMAFGWVGALLGKAPVLKSSGRILVGGWLAMAITYGLTKLLGHSGL 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23912904 23913560 - Bma027675.1 Bma08g00488 87315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00488 218 Pfam VIT family 45 112 IPR008217 GO:0005384|GO:0030026
Bma08g00488 218 Pfam VIT family 123 210 IPR008217 GO:0005384|GO:0030026
Bma08g00488 218 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 18 214 IPR008217 GO:0005384|GO:0030026
Bma08g00488 218 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 18 214 - -
Bma08g00488 218 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00451 Bma-Chr8:18138112 Bma08g00488 Bma-Chr8:23912904 9.67E-156 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00488 K22736 - egr:104419937 233.032