Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma08g00488 | ATGGCAGCGAGTCCAATAACAGAAGTTGAGCCACACAAATCGCCCAGTCCTCCCATGGACGTGGAGGCGCAACAACCTGACCCATCGAAAGAAATGGTCGAGGATTTTGACTACTCGAAGAGAGCACAGTGGCTTCGAGCGGCTGTGCTTGGCGCCAACGATGGCCTGCTCTCTGTGGCAAGCCTGATGATGGGCATTGGCGCCATTCACGAGGACTCTAAGACCATGTTGCTTACAGGCGTTGCCGGGCTGGTTGGTGGAGCTTCAAGCATGGCCATTGGAGAGTTCGGGTCTGTCTACTCACAGCGTGACATTGAAGTTGCCCAAATTAAGAGAGCTGGGATTGGGAAGGTAGAGAGTGAGAAGGACAGAGAGAAATTGCCCAACCCTTTCCATGCAGCTGCGGCCTCGGCGTCTGCGTTCTCAGTGGGGGCAACTGTGCCACTGCTTGCGGCGTCTTTCGTGCGTGTTTTCTGGATGAGGGTGGTGGTCGTGGCGGTTGTTGTGAGCTTGGCTTTAATGGCTTTTGGATGGGTGGGGGCGTTGCTGGGGAAGGCGCCTGTGCTCAAGTCGAGTGGGAGAATTTTGGTTGGTGGGTGGTTGGCCATGGCCATCACCTACGGCTTAACAAAGCTTCTTGGTCATTCTGGACTATGA | 657 | 55.1 | MAASPITEVEPHKSPSPPMDVEAQQPDPSKEMVEDFDYSKRAQWLRAAVLGANDGLLSVASLMMGIGAIHEDSKTMLLTGVAGLVGGASSMAIGEFGSVYSQRDIEVAQIKRAGIGKVESEKDREKLPNPFHAAAASASAFSVGATVPLLAASFVRVFWMRVVVVAVVVSLALMAFGWVGALLGKAPVLKSSGRILVGGWLAMAITYGLTKLLGHSGL | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 23912904 | 23913560 | - | Bma027675.1 | Bma08g00488 | 87315 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma08g00488 | 218 | Pfam | VIT family | 45 | 112 | IPR008217 | GO:0005384|GO:0030026 | |
Bma08g00488 | 218 | Pfam | VIT family | 123 | 210 | IPR008217 | GO:0005384|GO:0030026 | |
Bma08g00488 | 218 | PANTHER | FE(2+)/MN(2+) TRANSPORTER PCL1 | 18 | 214 | IPR008217 | GO:0005384|GO:0030026 | |
Bma08g00488 | 218 | PANTHER | VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED | 18 | 214 | - | - | |
Bma08g00488 | 218 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma08g00451 | Bma-Chr8:18138112 | Bma08g00488 | Bma-Chr8:23912904 | 9.67E-156 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma08g00488 | K22736 | - | egr:104419937 | 233.032 |