Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00514 ATGGACACAAAAACAGAAGATAATTCAGAATCGTCTCAGCCTAACACCTCTGGTGTCATACCATCTGAAGCACAGCATACTGCTGCTGTTACTGCTGAATCTGAGAATTTGAAACACGACTTGCCATCTGGGCTATCTCCTAATAGCATATCTTCTTGGGCAAAAAATTTGAAGATTTCACAGCCTTTCGTTGGAAGACAAGATGGCTCACCTAATGCAAACGTAGGAAAGTCCAGTTTTTCACGTTTCACCAGTGGCATTGGTTTGCAATTGTCCCCAAAAGATCCTTCTCCAGATGCCTCTGACAAAACTTCAAAAGTTCCAGAACCTGGTTTATTTGGGTCACTCACAAAAGGTTTTGTTGAGTCTTCTAGAAGTGCTGTGAAGGCTGTACAGGCCAAAGCTAGGCATGCTGTCTCTCAAAATAAACGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACATATATAACAGAGAACATAATTGCTATGGGATTCCCGGCGGGTGATATGAGTTCTGGGTTTTTTGGATATGTTGAGGGTTTCTACCGGAATCACATGGAAGAAGTTATAAAGTTCTTTGAAACTCATCACAAGGACAAATACAAAGTGTACAATCTTTGTTCTGAGAGGCTGTACGATGCTTCATTATTTGAAGGAAAGGTGGCTAGCTTTCCTTTTGATGATCATAATTGTCCCCCAGTTCGACTGATAATATCATTTTGTCAAAGTGCTTTCTCATGGCTGAAAGAAGATATTGAAAATGTAGTGGTTGTGCACTGCAAAGCAGGAATGGCTAGGACAGGATTGATGATATCTAGTCTTCTTTTATACCTGAAGTTTTTTCCAACTGCCGAGGAGTCCATTGACTACTACAACCAAAAAAGGTGTTTTGATGGCAGGGGCCTTATTCTACCTAGTCAGATTAGATATGTCAAATATTTTGAGCGTATATTAACATACTTCAATGGCGAAAATCCTCCTGGCCGTAGGTGCATGCTTAGGGGGTTTCGGCTTCATAGATGTCCTTATTGGATCAGGCCCTCTATCACTGTGTCTGATCATAATGGTGTTCTTTTTTCCTCCAAAAAACATCCAAGAACCAAAGATCTCTCTCCAGAAGATTTTTGGTTCAGTGCACCAAAGAAGGGGGTAATGGTATTTGCTTTGCCTGGGGAACCTGGTTTAACAGAGTTGGTGGGGGACTTCAAGATTCACTTCCATGATCGCCAAGGAGATTTCTACTGTTGGCTAAACACAACTATGACGGAAAACCGCAAAGCTCTCAACACTAATGATCTTGATGGGTTTGACAAGAGGAAACTGCCTTCCCCAAGATTTCAGGTTGAGGTTGTTTTAGTGGATTATAATGGTAGCATTCCCACAACACCTAATACTACAAATAATACGAAGAACTCCGAAGAAAGATCTAGTTCAACTTCTGCTCCATTTGATGGCAGTGCAGCTGCTCCAAAACCTACGGAAAATCCTGTGAATGAGGACAAAGATGATGTGTTTTCAGACGGCGAAGCCGATGAAGGTGGTTCTTCAAAGTCCAAGCAAGGCTCAAGCTCGACCTCTAATTCTGCGAGTGCGGCTCAAGATCAAGTTGTGAATTTAACAAGGGCAGCGGAGGAAGTTTCTTTGCGAGACAATATGTCGAATCGAATTGAAACCTCCGGTGTGCCCAAAAGTGATGCCTGGAGAGATGGTTCTGTCCAAGAAGCTCCAACCCCTGAAAGTGAGTTCAAAGCAATGGCTGCTGATGCTTCTGTTTTCACATTTGGCGATGAAGAGGATTATGAGAGTGATTAG 1818 42.3 MDTKTEDNSESSQPNTSGVIPSEAQHTAAVTAESENLKHDLPSGLSPNSISSWAKNLKISQPFVGRQDGSPNANVGKSSFSRFTSGIGLQLSPKDPSPDASDKTSKVPEPGLFGSLTKGFVESSRSAVKAVQAKARHAVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKDKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPVRLIISFCQSAFSWLKEDIENVVVVHCKAGMARTGLMISSLLLYLKFFPTAEESIDYYNQKRCFDGRGLILPSQIRYVKYFERILTYFNGENPPGRRCMLRGFRLHRCPYWIRPSITVSDHNGVLFSSKKHPRTKDLSPEDFWFSAPKKGVMVFALPGEPGLTELVGDFKIHFHDRQGDFYCWLNTTMTENRKALNTNDLDGFDKRKLPSPRFQVEVVLVDYNGSIPTTPNTTNNTKNSEERSSSTSAPFDGSAAAPKPTENPVNEDKDDVFSDGEADEGGSSKSKQGSSSTSNSASAAQDQVVNLTRAAEEVSLRDNMSNRIETSGVPKSDAWRDGSVQEAPTPESEFKAMAADASVFTFGDEEDYESD 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27821531 27836632 - Bma027727.1 Bma08g00514 87341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00514 605 Gene3D Protein tyrosine phosphatase superfamily 129 326 IPR029021 -
Bma08g00514 605 ProSiteProfiles C2 tensin-type domain profile. 330 457 IPR014020 -
Bma08g00514 605 ProSitePatterns Tyrosine specific protein phosphatases active site. 260 270 IPR016130 GO:0016311|GO:0016791
Bma08g00514 605 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 157 324 IPR029021 -
Bma08g00514 605 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 258 297 IPR000387 GO:0016311|GO:0016791
Bma08g00514 605 MobiDBLite consensus disorder prediction 459 486 - -
Bma08g00514 605 CDD PTP_PTEN 154 319 IPR045101 GO:0016791
Bma08g00514 605 ProSiteProfiles Phosphatase tensin-type domain profile. 144 323 IPR029023 -
Bma08g00514 605 MobiDBLite consensus disorder prediction 8 32 - -
Bma08g00514 605 SMART PTEN_C2_2 328 456 IPR014020 -
Bma08g00514 605 MobiDBLite consensus disorder prediction 86 111 - -
Bma08g00514 605 MobiDBLite consensus disorder prediction 1 51 - -
Bma08g00514 605 MobiDBLite consensus disorder prediction 497 516 - -
Bma08g00514 605 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 18 605 - -
Bma08g00514 605 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 18 605 - -
Bma08g00514 605 MobiDBLite consensus disorder prediction 517 539 - -
Bma08g00514 605 MobiDBLite consensus disorder prediction 459 581 - -
Bma08g00514 605 Gene3D - 332 457 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g01356 Bma08g00514 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00514 Bma-Chr8:27821531 Bma15g00872 Bma-Chr15:25723058 0 dispersed
Bma03g01356 Bma-Chr3:29597487 Bma08g00514 Bma-Chr8:27821531 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00514 K01110 - mnt:21410065 869.766