Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00532 ATGTTTTACTCTGGCCAGAACTGGGCATTTAGCAGCACCGGCAACTTCATGGACAACGATGTCGACGCAGATAGCTATGTGAGAACCAACACTTCTGCACTAACCAATGTGTCCGAGCCCAATTCACGACTCTACTCAACAGCAAGAACTTCTCCACTCTCGCTCACTTACTACGGACTCTGCCTGGTGAATGGCAATTACACCGTCAGTCTTCACTTTGCGGAGATTATATTCATTAATGGCTCTTCATTTTACAGCCTTGGAAAGAGAATATTTGATGTGTACATTCAGGGCAAGCTGGTTCTGAAAGATTTCAATATAGAACTTGAGGCTGGTGGCACCGGTATACCCATTATAAAAAACTTCACTGCTGCCGTCACGAGTCATACGTTGAAGATCCATTTATACTGGACTGGAAAAGGAACGACGGGAATCCCGTTAAGGGGAAATTATGGGCCCTTGATATCAGCTATATCAGTTGATCCTAATTTCAAACCTCCAACATATGCCAAGAAGAATTATATTAAAGTAATTGTTGGGACAACAGGAGCCACGTTGTTCCTTTTTATTTTGGTCTTGGTTATGAGGAGGAAGGGTTGCCTTGGAGGCACAGTCTCTGCAGATAAAGAGCTTAAAGGCATGGACCTGCTGACAGGGATGTTTACTCTAAGACAGATTAAAGCAGCTACGAAGAATTTTGATGCTGAAAACAAACTTGGGGAAGGTGGCTTTGGTGCAGTTTACGAAGGTCTTTTATCAGACGGAACTAAAATTGCAGTGAAACAGCTCTCTTCAAAATCGAAGCAAGGAAACCGTGAATTTGTGAATGAAATAGGCATGATATCTGGACTGCAACATCCGAATCTTGTAAAGCTTTACGGGTGTTGTGTTGAAGGAAACCAGCTATTGCTGGTTTATGAGTTTATGGAAAACAATTGTCTATCGCGCACTCTTTTCGTTAAACTGGATTTAAGTTTCTTTTTCGAAACATATTCAGGGAAGGACCCAACATGCAGATTGAAACTGGATTGGCCTACCAGGAAGAAGATCTGTGTGGGCATAGCCAGAGGATTAGCATATCTTCATGAGGAATCGAGACTAAAAATTGTACATCGAGATATCAAGACGAGTAATGTATTGCTTGACAAGGATTTTAATGCAAAAATTTCTGATTTTGGCTTGGCAAAGCTAAATGAAGATGATAATACTCACATCAGCACCCGTGTCGCAGGAACTATAGGTTATATGGCACCTGAATATGCAATGCGAGGTTACTTGACAAACAAGGCCGACGTTTATAGCTTCGGAGTTGTTGCGTTAGAAATTGTCAGCGGAAAGAGCAACACAAACTATAGGCCAAAGGAGGAGTTCGTTTACCTTCTTGATTGGGCATATGTATTGCAAGAGAGAGGAGGTCTATTGGAGTTGGTAGATCCATTGCTGGGTTCAAATTATTCAGTAGAAGAGGCAATGGTGATGCTAAATGTAGCTCTTTTATGCACCAATGCCTCCCCAACATTGAGGCCGACCATGACCCAAGTGGTGAGCATGCTTGAAGGTCGAACTCCCGTTCAAGACTTGCTCGCTGATCCTGGTTTCTCAACCGATCCCAAATACAAAGTCATAAGGAATCACTTCTGGCAGCAACCTCATGCTTCGAGTTTCGACTCCTCAAGCTTATATATTGAAACTGAAGTAACTGCCCATCTCATACGGGTCAGTTCAGTCGAGTCTGAAAAGATGAAGACCGCACTGGTAGCTTCATAG 1767 42.78 MFYSGQNWAFSSTGNFMDNDVDADSYVRTNTSALTNVSEPNSRLYSTARTSPLSLTYYGLCLVNGNYTVSLHFAEIIFINGSSFYSLGKRIFDVYIQGKLVLKDFNIELEAGGTGIPIIKNFTAAVTSHTLKIHLYWTGKGTTGIPLRGNYGPLISAISVDPNFKPPTYAKKNYIKVIVGTTGATLFLFILVLVMRRKGCLGGTVSADKELKGMDLLTGMFTLRQIKAATKNFDAENKLGEGGFGAVYEGLLSDGTKIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLYGCCVEGNQLLLVYEFMENNCLSRTLFVKLDLSFFFETYSGKDPTCRLKLDWPTRKKICVGIARGLAYLHEESRLKIVHRDIKTSNVLLDKDFNAKISDFGLAKLNEDDNTHISTRVAGTIGYMAPEYAMRGYLTNKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQERGGLLELVDPLLGSNYSVEEAMVMLNVALLCTNASPTLRPTMTQVVSMLEGRTPVQDLLADPGFSTDPKYKVIRNHFWQQPHASSFDSSSLYIETEVTAHLIRVSSVESEKMKTALVAS 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 30994763 30997352 - Bma027774.1 Bma08g00532 87359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00532 588 Gene3D - 3 162 - -
Bma08g00532 588 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 540 - -
Bma08g00532 588 Gene3D Phosphorylase Kinase; domain 1 204 308 - -
Bma08g00532 588 Pfam Protein tyrosine and serine/threonine kinase 235 468 IPR001245 GO:0004672|GO:0006468
Bma08g00532 588 ProSitePatterns Protein kinases ATP-binding region signature. 239 261 IPR017441 GO:0005524
Bma08g00532 588 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 540 - -
Bma08g00532 588 Pfam Malectin domain 24 158 IPR021720 -
Bma08g00532 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 369 381 IPR008271 GO:0004672|GO:0006468
Bma08g00532 588 Gene3D Transferase(Phosphotransferase) domain 1 329 527 - -
Bma08g00532 588 SMART serkin_6 233 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00532 588 ProSiteProfiles Protein kinase domain profile. 233 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00532 588 CDD STKc_IRAK 239 520 - -
Bma08g00532 588 SUPERFAMILY Protein kinase-like (PK-like) 218 519 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00532 Bma-Chr8:30994763 Bma10g00460 Bma-Chr10:5186200 0 dispersed
Bma08g00532 Bma-Chr8:30994763 Bma13g00923 Bma-Chr13:39663759 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66661 PF07714 PK_Tyr_Ser-Thr 5.70E-49 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00532 - - hbr:110640293 902.508