Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00533 ATGAAACTGAAGCAACAAGATGAAGAGATCAAACAGATGTGCACGAGTATCGAACTCCATGAGGTGAACCTTGACCGTGGCCTCCGTTTTTCGTCGGAGGTTCAGCCAGTTACCGCCGTTGATAACTCTGACAATGATGGGGAGGGCCTCTTGATTCCTCCTCTCAACTTCTCGGCTGTCGAAGCCGGTATTTTTCGCTCCGGCTTCCCCGATTACGCTAACTTCTCCTTTATTCAAACCCTAGGGCTCCGCTCCATCATATACCTGTGTCCAGAGCCTTATCCTGAGGCAAATATGGAGTTTGTCAAGTCTAATGGGATCACTTTGTATCAATTTGGAATTGAAGGCCATAAGGAGCCCTATGTAAACATCCCAGACAAAAAAATTCGCGAGGCACTGAAAGTTATGCTTGACGTCAGGAATCACCCACTTCTAATTCACTGTAACAGAGGAAAGGATGCCTGCGTAAAATGCAGAGATGGTGCTTATCATCTGTATTTTCCGAGTACCAACGGTTTGCAGCCGCTAAAGCTAGAGTTTGTGATCAGAGGTTCATAG 558 46.42 MKLKQQDEEIKQMCTSIELHEVNLDRGLRFSSEVQPVTAVDNSDNDGEGLLIPPLNFSAVEAGIFRSGFPDYANFSFIQTLGLRSIIYLCPEPYPEANMEFVKSNGITLYQFGIEGHKEPYVNIPDKKIREALKVMLDVRNHPLLIHCNRGKDACVKCRDGAYHLYFPSTNGLQPLKLEFVIRGS 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 31164361 31166227 - Bma027776.1 Bma08g00533 87360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00533 185 Pfam Tyrosine phosphatase family 51 153 IPR004861 -
Bma08g00533 185 Gene3D Protein tyrosine phosphatase superfamily 50 155 IPR029021 -
Bma08g00533 185 PANTHER - 12 154 - -
Bma08g00533 185 PRINTS Plant and fungal dual specificity phosphatase signature 107 121 IPR020428 GO:0016791
Bma08g00533 185 PRINTS Plant and fungal dual specificity phosphatase signature 124 138 IPR020428 GO:0016791
Bma08g00533 185 PRINTS Plant and fungal dual specificity phosphatase signature 51 68 IPR020428 GO:0016791
Bma08g00533 185 PRINTS Plant and fungal dual specificity phosphatase signature 88 101 IPR020428 GO:0016791
Bma08g00533 185 PANTHER TYROSINE-PROTEIN PHOSPHATASE 12 154 - -
Bma08g00533 185 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 51 153 IPR029021 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g01308 Bma08g00533 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01308 Bma-Chr3:25800582 Bma08g00533 Bma-Chr8:31164361 1.10E-78 dispersed
Bma02g01405 Bma-Chr2:56279284 Bma08g00533 Bma-Chr8:31164361 5.85E-64 wgd
Bma08g00533 Bma-Chr8:31164361 Bma08g00538 Bma-Chr8:31588203 3.27E-41 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00533 K18045 - zju:107417147 199.134