Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma08g00538 | ATATACCTGTGTCCAGAGCCTTATCCTGAGGCAAATATGGAGTTTGTCAAGTCTAATGGGATCACTTTGTATCAATTTGGAATTGAAGGCCATAAGGTGTATATTGATGATCATTTCTTCATTCAGGAGCCCTATGTAAACATCCCAGACAAAAAAATTCGCGAGGCACTGAAAGTTATGCTTGACGTCAGGAATCACCCACTTCTAATTCACTGTAACAGAGGAAAGCATCGAACTGGTTGTTTGGTAGGATGCCTGCGTAAAATGCAGAGATGGTGCTTAACATCTGTATTTTCCGAGTACCAGCGGTTTGCAGCCGCTAAAGCTAGAGTTTGTGATCAGAGGTTCATAGAAGTTTTTGATGTTTCTACCTTAAGCCATCTGCCCATTCCTTTTTCTAGCTTTCGACAGTAA | 414 | 41.3 | IYLCPEPYPEANMEFVKSNGITLYQFGIEGHKVYIDDHFFIQEPYVNIPDKKIREALKVMLDVRNHPLLIHCNRGKHRTGCLVGCLRKMQRWCLTSVFSEYQRFAAAKARVCDQRFIEVFDVSTLSHLPIPFSSFRQ | 137 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 31588203 | 31589869 | - | Bma027784.1 | Bma08g00538 | 87365 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma08g00538 | 137 | Gene3D | Protein tyrosine phosphatase superfamily | 1 | 124 | IPR029021 | - | |
Bma08g00538 | 137 | PRINTS | Plant and fungal dual specificity phosphatase signature | 2 | 15 | IPR020428 | GO:0016791 | |
Bma08g00538 | 137 | PRINTS | Plant and fungal dual specificity phosphatase signature | 21 | 35 | IPR020428 | GO:0016791 | |
Bma08g00538 | 137 | PRINTS | Plant and fungal dual specificity phosphatase signature | 48 | 62 | IPR020428 | GO:0016791 | |
Bma08g00538 | 137 | Pfam | Tyrosine phosphatase family | 1 | 126 | IPR004861 | - | |
Bma08g00538 | 137 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 70 | 80 | IPR016130 | GO:0016311|GO:0016791 | |
Bma08g00538 | 137 | PANTHER | - | 1 | 134 | - | - | |
Bma08g00538 | 137 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 1 | 134 | - | - | |
Bma08g00538 | 137 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 1 | 121 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g01405 | Bma-Chr2:56279284 | Bma08g00538 | Bma-Chr8:31588203 | 1.48E-67 | dispersed | |
Bma08g00533 | Bma-Chr8:31164361 | Bma08g00538 | Bma-Chr8:31588203 | 3.27E-41 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma08g00538 | K18045 | - | gmx:100814279 | 218.394 |