Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00539 ATGGATCCCTTGCTTCTTATCACCATCTGCATCTCACCCGTCCTTTACCTGATTATTCTCCGCCTTTTCTTCTCCGGCGGCCCCAACAAAGCAATCGGCGATAAAACACACAACTGCAAACTCCCTCCCGGTCCAATTTCAATTCCGATCATCAGCGACCTCTCATGGCTGGTCAAGACCTTCAGTGAAATCGAGCCCCTTCTCCGAAATTTTCACGCCAAGTATGGCCCCGTCGTCACGCTGCGCATCGGACCTCGGCCGGCAATTTTCATCTCCGATCGGTCCCTCGCTCACAAAGCCCTCGTTCAAATGGGAGCCATCTTCGCCGATCGTCCGCCTGCTTTTGAGACGGACAGAATAATTAGTGCTAATAATCACAACGTAAACTCCGCTTTCTACGGCCCCACATGGCGTCTACTTCGCCGGAATCTCACTTCGGAGATCCTGCATCCTTCTAGAATCAAATCGTACTCCGCTGCGCGCAAGTGGGTCCTCGAAATTCTCCAAAATCGCCTCGTATGTCACTCACCGGAGCTCCCAGTGGTAGGAGATTTCCAGTACGCCATGTTTTGCCTGCTAGTGCTGATGTGCTTCGGCGACAAGCTTGGAGAGGACCAGGTAAAGAAAATTGAAAAGGTTCAGCGGGAGTTTCTGTTAAGCATAAGTAGTTTCAACCTGCTTAACTTCTGGCCGGCGATCACCAAGATGCTTTTCCCGAAGCGATGGGAGGAATTCTTCCGATTGCTGAAAAACAAAGAGGACGTACACATTCCTTTGATAGAAGCACGAAGGAATTTAAAGAAGAAATTAAGCAGCGAAAAGCAGCTCCAAGAAAAAGAAGAAGCTTCAATCTCATACGTCGATACATTATTGAGTATAGAGCTTCCGGAGGAGAAGAGAAAGCTTGAAAACAGAGAGATAGTAAGCCTATGCTCCGAGCTCTTAGATGCAGGTACCGATACTACGACAGCAGCTCTTCAATGGACAATGGCGAATCTGGTGAAATACTCACGAATCCAAGAGAAGCTCTTTCAAGAGATGAGAGGGATTTTAGAATTACCAGAAGAGGAGGTGAAAGAAGAACATCTGGAAAAGCTGCCATATCTGAAAGCTGTGGTCATGGAAAGCTTAAGAAGACATCCACCGGCCCATTTCGTGCTGCCACACGCAGTTACAGAAGACGTGGTTTTCGATTCTCACTTGATACCCAAAAATGGAAGCGTCAATTTTCTGATCGCAGAAATGGGAAGAGATCCGAAGGTGTGGGAAGAGCCGATGGAGTTCAAGCCGGAGAGGTTCTTGAATGGGAAAGAAGCTTTCGACATAACCGGCAGTAAGGAGATAAAGATGATTCCCTTCGGGGCTGGGAGGAGGATGTGCCCAGGCTATAGCTTGGCGCTGCTTCACTTGGAGTACTTCGTGGCTAATTTAGTTTGGAAGTTTGAGTGGAAAGCCATTGAAGGGGATGAAGTTGATCTGTCTGAAAAGGAAGAGTTCACAGTGGTGATGAAGAATCCATTGAAGGCCGTGGTAACTCCAAGGATGAAGGCGTAG 1554 48.07 MDPLLLITICISPVLYLIILRLFFSGGPNKAIGDKTHNCKLPPGPISIPIISDLSWLVKTFSEIEPLLRNFHAKYGPVVTLRIGPRPAIFISDRSLAHKALVQMGAIFADRPPAFETDRIISANNHNVNSAFYGPTWRLLRRNLTSEILHPSRIKSYSAARKWVLEILQNRLVCHSPELPVVGDFQYAMFCLLVLMCFGDKLGEDQVKKIEKVQREFLLSISSFNLLNFWPAITKMLFPKRWEEFFRLLKNKEDVHIPLIEARRNLKKKLSSEKQLQEKEEASISYVDTLLSIELPEEKRKLENREIVSLCSELLDAGTDTTTAALQWTMANLVKYSRIQEKLFQEMRGILELPEEEVKEEHLEKLPYLKAVVMESLRRHPPAHFVLPHAVTEDVVFDSHLIPKNGSVNFLIAEMGRDPKVWEEPMEFKPERFLNGKEAFDITGSKEIKMIPFGAGRRMCPGYSLALLHLEYFVANLVWKFEWKAIEGDEVDLSEKEEFTVVMKNPLKAVVTPRMKA 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 31716997 31718550 - Bma027787.1 Bma08g00539 87366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00539 517 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00539 517 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00539 517 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00539 517 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00539 517 Gene3D Cytochrome P450 34 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00539 517 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00539 517 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00539 517 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00539 517 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00539 517 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00539 517 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00539 517 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00539 517 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00539 517 PANTHER CYTOCHROME P450 6 513 - -
Bma08g00539 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Bma08g00539 517 Pfam Cytochrome P450 42 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00539 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 513 - -
Bma08g00539 517 Coils Coil 259 279 - -
Bma08g00539 517 SUPERFAMILY Cytochrome P450 42 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00534 Bma-Chr8:31319612 Bma08g00539 Bma-Chr8:31716997 0 dispersed
Bma08g00539 Bma-Chr8:31716997 Bma10g00994 Bma-Chr10:23099920 0 dispersed
Bma08g00536 Bma-Chr8:31571219 Bma08g00539 Bma-Chr8:31716997 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00539 K24184 - rcu:8283072 647.506