Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00567 ATGGCAGATGGATCACTGTATCCATCAATATATCAGAAGATATCTGGGAAGTCCTACCTGATTGGTAGAATCTCTCCCAACTTCCAGACTAGGGATTATTCTTCAAATGGTGCATATCTCAATAGAAGTCTGCAGAGTCCTCTGCATCCAGCCTTCCAAGGCTCTGGTTTGGCTGTTGCCCCTTCAATTTCTTCCATTTATGTACAAGCTCCAGCAGAGAAAGGTTTACAAGGCTTTCTTATTGATTTTCTAATGGGAGGGGTGTCTGCTGCTGTATCCAAATCAGCTGCTGCTCCCATAGAGCGAGTTAAATTGCTTATTCAAAATCAAGACGAGATGATCAAAGCCGGTCGCTTGTCTGAGCCTTATAAGGGAATTACTGATTGCTTTGCAAGAACTGTTAAGGATGAAGGCGTCTTAGCTCTTTGGAGAGGGAACAGCACTAATGTCATCAGATATTTCCCAACGCAGGCCTTGAATTTTGCTTTCAAGGATTACTTCAAAAGGCTGTTCAACTTCAAAAAAGACAGAGATGGTTACTGGAAATGGTTTGCTGGGAACTTGGCATCTGGTGGCGCTGCTGGTGCTTCTTCTCTTTTGTTTGTTTATTCCTTGGACTATGCTAGAACACGTCTGGCAAATGATGCCAAGTCTGCTAAAAAGGGCGGCGAAAGACAGTTTAATGGTTTAATTGATGTTTACAAGAAAACACTTAAATCGGATGGCATTGCTGGACTTTATCGTGGCTTTAACATCTCATGCATTGGAATTATTGTGTACCGGGGGCTTTATTTTGGAATGTATGACTCTCTGAAACCGGTGGTTCTGGTTGGTGGACTAGAGGACAGTTTCCTTGCTAGTTTCTTGCTTGGATGGGGTATCACAATAGGTGCAGGATTGGCCTCTTACCCAATTGACACTGTCCGAAGAAGGATGATGATGACCTCCGGAGAAGCTGTAAAATACAAAAGCTCAATGGATGCATTCAACCAAATCGTCCAGAAAGAAGGTGCTAAGTCCCTCTTCAAAGGTGCCGGAGCAAACATATTGCGTGCCGTTGCCGGTGCTGGTGTGCTAGCTGGCTATGATAAGCTGCAGGTTCTCGTGTTTGGCAAGAAATACGGATCTGGGGGCGGTGGTTAG 1143 44.44 MADGSLYPSIYQKISGKSYLIGRISPNFQTRDYSSNGAYLNRSLQSPLHPAFQGSGLAVAPSISSIYVQAPAEKGLQGFLIDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYKGITDCFARTVKDEGVLALWRGNSTNVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKSAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFNISCIGIIVYRGLYFGMYDSLKPVVLVGGLEDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFNQIVQKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVLVFGKKYGSGGGG 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 33843737 33846109 - Bma027835.1 Bma08g00567 87394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00567 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 170 IPR018108 -
Bma08g00567 380 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-RELATED 9 379 - -
Bma08g00567 380 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 9 379 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma08g00567 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 182 274 IPR018108 -
Bma08g00567 380 SUPERFAMILY Mitochondrial carrier 78 364 IPR023395 -
Bma08g00567 380 Pfam Mitochondrial carrier protein 181 274 IPR018108 -
Bma08g00567 380 Pfam Mitochondrial carrier protein 79 174 IPR018108 -
Bma08g00567 380 Pfam Mitochondrial carrier protein 283 370 IPR018108 -
Bma08g00567 380 Gene3D Mitochondrial carrier domain 80 375 IPR023395 -
Bma08g00567 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 282 368 IPR018108 -
Bma08g00567 380 PRINTS Mitochondrial carrier protein signature 82 95 IPR002067 GO:0055085
Bma08g00567 380 PRINTS Mitochondrial carrier protein signature 291 313 IPR002067 GO:0055085
Bma08g00567 380 PRINTS Mitochondrial carrier protein signature 95 109 IPR002067 GO:0055085
Bma08g00567 380 PRINTS Mitochondrial carrier protein signature 247 265 IPR002067 GO:0055085
Bma08g00567 380 PRINTS Mitochondrial carrier protein signature 145 165 IPR002067 GO:0055085
Bma08g00567 380 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Bma08g00567 380 PRINTS Adenine nucleotide translocator signature 123 144 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma08g00567 380 PRINTS Adenine nucleotide translocator signature 182 195 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma08g00567 380 PRINTS Adenine nucleotide translocator signature 156 168 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma08g00567 380 PRINTS Adenine nucleotide translocator signature 79 91 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma08g00567 380 PRINTS Adenine nucleotide translocator signature 287 303 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00567 Bma-Chr8:33843737 Bma10g00889 Bma-Chr10:16891152 0 dispersed
Bma08g00567 Bma-Chr8:33843737 Bma15g00461 Bma-Chr15:5042597 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00567 K05863 - pvy:116123838 605.52