Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00569 ATGGAGACGCCCCTGCTGAGCGGGGAGAGCAGCGGGAGTCACAGTGGTCGCCCCGACGATCCCCATTTGAAATTCAAACGCCGCTCTGACGCTATTACTTATGGCTCGTCGTATCAAAGAGCAGCGGCCCTTGTTGATCTGGCTGAAGATGGCGTTGGTATACCGGAGCAGATTCTTGAGCATTCAAGCTTTCACAACGCAGCCAAGTTCTACTTCATTTTTATTAGACTCGATTTTATATGGACTCTCAATTACTTTGCACTGATTGCCCTTAATTTCTTTGAGAAACCCTTATGGTGCTCCAAGTATACCAAATATACTTGTAGTGATAGAGATTATTTCTATCTTGGGGAGTTGCCTTACCTAACTAGTGTTGAGTCTCTAACCTACGAGGGCGTAACTCTCATATTGCTTCTAATTCATACTTTCTTTCCAATTACATATGAAGGGTTCAACCTCTTTTGGAAAAATCATTTAAATAAATTAAAGGTTGCTTGCCTTCTGATCTTGGTGGCTGACTTACTTGTTTATACTATATATTTGTCACCTGTGGCCTTTGATTACCTTCCGCTCAGACTTGCTCCATATATAAGAGTTGTCTTTTTCATCATGAATATCAGGGATTTACGAGATAGCATCGTCATCCTGGCTGGAATGCTGGGCACATATTTGAACGTCTTGGCTTTGGGGATTTTATTTCTTGTTTTCTGCAGTTGGGTAGCATATGTCATGTTTGAAGATACACAAGAAGGAACAGCTGTATTTACATCATTCGGCACCACGTTATATCAAATGTTTGTGTTATTTACCACGTCCAATAATCCAGATGTTTGGATACCAGCATACAAGGCTTCACGGTGGTATTGCTTGTTTTTCGTCCTCTACGTGCTATTGGGAGTGTATTTTGTTACAAACTTGGTTCTTGCTGTTGTATATGACAGTTTTAAAAGTCAGCTAGTAAAGCAAGTTTCAGAGAAGGATCGCAAAAGGATAAGTACATTGAAGAAAGCGTTTAGTCTTATCGATAGTAATAATGATGGATTTATTGACAAAGATCAGTGCATACAACTGTTTGAAGAGCTGAACAAATACAGGTCTTTGCCAAAGATATCAAGGGACGACTTTGAATTAATATTTGATGAACTAGATGATAGTCGTGATTTCAAGATTAACGTGGATGAATTTGCTGATTTATGTAACGCAATTGCTCTGAAATTCCAAAAGGAGGATACCCCGTCTTGGTTGGAACAGTACCCATACTTCTATCGTTCATCTGCGTCTGAGATGTTGAAAACATTTGTTCGAAGCCCTAAATTTGGATACTTAATATCCTTCATTCTCGTGCTGAATCTAGTAGCAGTTATTGTCGAGACAACACTTGATATAGAGAACAGTTCTGGCCAAACAATATGGCAAGAGGTGGAATTTGTATTTGGATGGATATACGTCGCGGAGATGGCTCTAAAAGTATATTCATATGGATTTGAGAATTATTGGAGAGATGGTCAAAATCGGTTCGATTTTGTTGTCACGTGGGTAATAGTCATTGGAGAAACTATAACGTTTGTGTCTCCCAATGGGTTAACTTTTCTTTCAAATGGAGAATGGTATGAGAATTTCATTTATTTCTCTTTTATACTCAGTGCTAAATGGGTTAACATTAGAGCTGCTTCTCTCTTTTTCAGGATTCGTTACCTTCTTCTTGCAAGAATGTTACGTTTGATACGACTGCTGATGTATGTCCAGCAATACAGAGCTTTTATTGCCACATTCTTAACTCTTATACCAAGTTTGATGCCATATCTCGGGACCATATTCTGTGTCCTTTCTATATATTGCTCTCTTGGCCTGCAGATCTTTGGAGGGCTTGTTAATGAAGGAAATTCCACATTGGACGACACAGATCTTGCTGATAATGACTATCTACTTTTCAACTTCAATGATTTCCCGAATGGGATGGTGACACTTTTCAATTTGCTGGTCATGGGTAACTGGCAAGTCTGGATGCAGAGCTACCGGGATCTGACAGGAACTGCTTGGAGCCTCGTGTATTTCGTCAGTTTCTACTTAATAACTGTGTTGCTGCTTTTGAATTTGGTCGTAGCTTTTGTGTTGGAGGCATTCTTTGCTGAATTGGAGATGGAGTCATCAGAAAATTGCCAAGACCAGGACAAGGAAGGAGAAGGTCAGAAGGAGCGGCGTAGATCTGTTGGCACCAAAACGAGGAGCCAGAGAGTTGAGATGCTCCTTCATCATATGTTGAGCGCAGAGTTAAATCAGAAACAGTGTTCTGACTCTTAA 2301 40.16 METPLLSGESSGSHSGRPDDPHLKFKRRSDAITYGSSYQRAAALVDLAEDGVGIPEQILEHSSFHNAAKFYFIFIRLDFIWTLNYFALIALNFFEKPLWCSKYTKYTCSDRDYFYLGELPYLTSVESLTYEGVTLILLLIHTFFPITYEGFNLFWKNHLNKLKVACLLILVADLLVYTIYLSPVAFDYLPLRLAPYIRVVFFIMNIRDLRDSIVILAGMLGTYLNVLALGILFLVFCSWVAYVMFEDTQEGTAVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLLGVYFVTNLVLAVVYDSFKSQLVKQVSEKDRKRISTLKKAFSLIDSNNDGFIDKDQCIQLFEELNKYRSLPKISRDDFELIFDELDDSRDFKINVDEFADLCNAIALKFQKEDTPSWLEQYPYFYRSSASEMLKTFVRSPKFGYLISFILVLNLVAVIVETTLDIENSSGQTIWQEVEFVFGWIYVAEMALKVYSYGFENYWRDGQNRFDFVVTWVIVIGETITFVSPNGLTFLSNGEWYENFIYFSFILSAKWVNIRAASLFFRIRYLLLARMLRLIRLLMYVQQYRAFIATFLTLIPSLMPYLGTIFCVLSIYCSLGLQIFGGLVNEGNSTLDDTDLADNDYLLFNFNDFPNGMVTLFNLLVMGNWQVWMQSYRDLTGTAWSLVYFVSFYLITVLLLLNLVVAFVLEAFFAELEMESSENCQDQDKEGEGQKERRRSVGTKTRSQRVEMLLHHMLSAELNQKQCSDS 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 33939921 33949757 - Bma027839.1 Bma08g00569 87396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00569 766 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
Bma08g00569 766 Pfam Ion transport protein 439 708 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bma08g00569 766 Pfam Ion transport protein 136 318 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bma08g00569 766 Gene3D - 429 587 IPR027359 -
Bma08g00569 766 MobiDBLite consensus disorder prediction 719 744 - -
Bma08g00569 766 SMART efh_1 374 402 IPR002048 GO:0005509
Bma08g00569 766 SMART efh_1 333 361 IPR002048 GO:0005509
Bma08g00569 766 Gene3D - 208 316 - -
Bma08g00569 766 MobiDBLite consensus disorder prediction 1 24 - -
Bma08g00569 766 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 764 IPR044581 GO:0005245
Bma08g00569 766 Gene3D - 317 417 - -
Bma08g00569 766 CDD EFh 334 398 IPR002048 GO:0005509
Bma08g00569 766 Gene3D - 588 749 - -
Bma08g00569 766 SUPERFAMILY Voltage-gated potassium channels 436 708 - -
Bma08g00569 766 ProSiteProfiles EF-hand calcium-binding domain profile. 329 364 IPR002048 GO:0005509
Bma08g00569 766 SUPERFAMILY EF-hand 327 402 IPR011992 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00734 Bma08g00569 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00734 Bma-Chr3:6624962 Bma08g00569 Bma-Chr8:33939921 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00569 K16900 - csv:101206980 1121.3