Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00580 ATGGATTCCATTCGTTTTCCCTCCATAATAATCATTCTGTTTTTAGCATTTGCAGGCTCGGCTGAAGCTCAACTACAGCTTGGCTACTACTCAAAGAGCTGCCCAAACGCTGAGAAAATAGTGCTTGATTTCGTCAAACAGCATATCCACAACGCTCCATCTCTGGCTGCTGCTCTAATTAGAATGCACTTCCATGATTGCTTTGTCAGGGGTTGCGACGCGTCTGTGCTTTTAAACTCGACGTCTGGTAACCAATCGGAAATGGAGGCTGTTCCGAATGAGACAGTGAGAGGGTTTGACTTCATTGACAGAATTAAGACCCTTTTAGAAGCTGAATGTCCTGGAGTTGTTTCTTGCGCAGACATCATCACTTTGGCTGCCAGAGACTCCATTGTAGAGACGGGAGGTCCTTACTGGAAGGTTCCAACTGGTAGAAGAGATGGAGTAGTCTCAATATCTTCAGAAGCTAATGCTAATATCCCAGCTCCATCTGCAAACTTGACAACTCTCCAGACGCTCTTTGCCAACCAGGGTCTTGATCTCAAAGACCTGTTAATTTCTTACAAATTTGATCCAAAATTACTTGCAGGGGCTCACACAATTGGTGTAGCTCATTGTTCAGAAATCACGACCAGGCTATACAATTTCACGGGAGTCGGAGACGAAGATCCGTCTCTCGACAGCGAATATGCTGCAAATCTCAAGGCTAGGAAATGCAAAAGCATTAGTGATAATACAACAAAGATTGAAATGGATCCTGGAAGTGCCAGGACGTTTGACATGAGCTACTTCTCCCTTCTTCTCAAAAGAAGGGGTCTTTTTCAATCTGATGCTGCTTTAATTACAGACTCAACTACAAAATCCTATATAACTCAGCTTCTTCAAGGCTCACTTGATAATTTCTTCTACGAATTTGCTGCCTCGATCGAGAAGATGGGTCGGATCAATGTGAAGACCGGATCGGAGGGTGAGATCAGGAAGAAGTGTGGAGTGGTGAATAGTTGA 1005 44.08 MDSIRFPSIIIILFLAFAGSAEAQLQLGYYSKSCPNAEKIVLDFVKQHIHNAPSLAAALIRMHFHDCFVRGCDASVLLNSTSGNQSEMEAVPNETVRGFDFIDRIKTLLEAECPGVVSCADIITLAARDSIVETGGPYWKVPTGRRDGVVSISSEANANIPAPSANLTTLQTLFANQGLDLKDLLISYKFDPKLLAGAHTIGVAHCSEITTRLYNFTGVGDEDPSLDSEYAANLKARKCKSISDNTTKIEMDPGSARTFDMSYFSLLLKRRGLFQSDAALITDSTTKSYITQLLQGSLDNFFYEFAASIEKMGRINVKTGSEGEIRKKCGVVNS 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 35462504 35463841 - Bma027854.1 Bma08g00580 87407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00580 334 Gene3D - 28 333 - -
Bma08g00580 334 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Bma08g00580 334 PANTHER PEROXIDASE 25-RELATED 6 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 PANTHER PEROXIDASE 6 333 - -
Bma08g00580 334 Pfam Peroxidase 43 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 Gene3D Peroxidase, domain 2 161 312 - -
Bma08g00580 334 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 ProSiteProfiles Plant heme peroxidase family profile. 24 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g00580 334 CDD secretory_peroxidase 24 332 IPR033905 GO:0004601|GO:0042744
Bma08g00580 334 SUPERFAMILY Heme-dependent peroxidases 24 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00697 Bma-Chr3:6104166 Bma08g00580 Bma-Chr8:35462504 0 dispersed
Bma08g00580 Bma-Chr8:35462504 Bma12g00789 Bma-Chr12:36482569 9.99E-176 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00580 K00430 - jre:109020700 498.819