Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma08g00580 | ATGGATTCCATTCGTTTTCCCTCCATAATAATCATTCTGTTTTTAGCATTTGCAGGCTCGGCTGAAGCTCAACTACAGCTTGGCTACTACTCAAAGAGCTGCCCAAACGCTGAGAAAATAGTGCTTGATTTCGTCAAACAGCATATCCACAACGCTCCATCTCTGGCTGCTGCTCTAATTAGAATGCACTTCCATGATTGCTTTGTCAGGGGTTGCGACGCGTCTGTGCTTTTAAACTCGACGTCTGGTAACCAATCGGAAATGGAGGCTGTTCCGAATGAGACAGTGAGAGGGTTTGACTTCATTGACAGAATTAAGACCCTTTTAGAAGCTGAATGTCCTGGAGTTGTTTCTTGCGCAGACATCATCACTTTGGCTGCCAGAGACTCCATTGTAGAGACGGGAGGTCCTTACTGGAAGGTTCCAACTGGTAGAAGAGATGGAGTAGTCTCAATATCTTCAGAAGCTAATGCTAATATCCCAGCTCCATCTGCAAACTTGACAACTCTCCAGACGCTCTTTGCCAACCAGGGTCTTGATCTCAAAGACCTGTTAATTTCTTACAAATTTGATCCAAAATTACTTGCAGGGGCTCACACAATTGGTGTAGCTCATTGTTCAGAAATCACGACCAGGCTATACAATTTCACGGGAGTCGGAGACGAAGATCCGTCTCTCGACAGCGAATATGCTGCAAATCTCAAGGCTAGGAAATGCAAAAGCATTAGTGATAATACAACAAAGATTGAAATGGATCCTGGAAGTGCCAGGACGTTTGACATGAGCTACTTCTCCCTTCTTCTCAAAAGAAGGGGTCTTTTTCAATCTGATGCTGCTTTAATTACAGACTCAACTACAAAATCCTATATAACTCAGCTTCTTCAAGGCTCACTTGATAATTTCTTCTACGAATTTGCTGCCTCGATCGAGAAGATGGGTCGGATCAATGTGAAGACCGGATCGGAGGGTGAGATCAGGAAGAAGTGTGGAGTGGTGAATAGTTGA | 1005 | 44.08 | MDSIRFPSIIIILFLAFAGSAEAQLQLGYYSKSCPNAEKIVLDFVKQHIHNAPSLAAALIRMHFHDCFVRGCDASVLLNSTSGNQSEMEAVPNETVRGFDFIDRIKTLLEAECPGVVSCADIITLAARDSIVETGGPYWKVPTGRRDGVVSISSEANANIPAPSANLTTLQTLFANQGLDLKDLLISYKFDPKLLAGAHTIGVAHCSEITTRLYNFTGVGDEDPSLDSEYAANLKARKCKSISDNTTKIEMDPGSARTFDMSYFSLLLKRRGLFQSDAALITDSTTKSYITQLLQGSLDNFFYEFAASIEKMGRINVKTGSEGEIRKKCGVVNS | 334 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 35462504 | 35463841 | - | Bma027854.1 | Bma08g00580 | 87407 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma08g00580 | 334 | Gene3D | - | 28 | 333 | - | - | |
Bma08g00580 | 334 | PRINTS | Haem peroxidase superfamily signature | 191 | 206 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | PRINTS | Haem peroxidase superfamily signature | 252 | 267 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | PRINTS | Haem peroxidase superfamily signature | 117 | 134 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | PRINTS | Haem peroxidase superfamily signature | 135 | 147 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | ProSitePatterns | Peroxidases active site signature. | 56 | 67 | IPR019794 | GO:0004601 | |
Bma08g00580 | 334 | PANTHER | PEROXIDASE 25-RELATED | 6 | 333 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | PANTHER | PEROXIDASE | 6 | 333 | - | - | |
Bma08g00580 | 334 | Pfam | Peroxidase | 43 | 293 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | Gene3D | Peroxidase, domain 2 | 161 | 312 | - | - | |
Bma08g00580 | 334 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | PRINTS | Plant peroxidase signature | 135 | 150 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | PRINTS | Plant peroxidase signature | 250 | 265 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | PRINTS | Plant peroxidase signature | 266 | 283 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | PRINTS | Plant peroxidase signature | 307 | 320 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | PRINTS | Plant peroxidase signature | 116 | 126 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | PRINTS | Plant peroxidase signature | 97 | 110 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 333 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Bma08g00580 | 334 | CDD | secretory_peroxidase | 24 | 332 | IPR033905 | GO:0004601|GO:0042744 | |
Bma08g00580 | 334 | SUPERFAMILY | Heme-dependent peroxidases | 24 | 333 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g00697 | Bma-Chr3:6104166 | Bma08g00580 | Bma-Chr8:35462504 | 0 | dispersed | |
Bma08g00580 | Bma-Chr8:35462504 | Bma12g00789 | Bma-Chr12:36482569 | 9.99E-176 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma08g00580 | K00430 | - | jre:109020700 | 498.819 |