Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00589 ATGGGGGTCTGTGTCTCGACTGGCATCCGAGCCAGCCAAAACGGCAGAATCCGGGGGAAGAAGGTTTCTCAATCTTGCCTCGAGAAGAGTTTCGGTGGACAGAGAAGATCAAAGACGACATTTTCCAATGATGTAATCGGTCTGAAACAACTCTTCTCGATTCCAAACAGGGTTTGCATAAATGGAAAGAGTCGAACCTCTTGCCTGTTCACTCAAAAAGGTCGCAAGGGGATCAACCAGGACACCATGATCGTATGGGAAGATTTCATTTCAGAGGGTGTAACTTTCTGTGGAGTGTTCGATGGTCATGGACCATACGGCCATCTCGTAGCTGGAAAAGTGATGGATTCATTCCCATTAAAGCTACTTTCATTCTTGCATAATTCTCTGTCCAAGAAAGACGACGAAACTGAATTCCACTCTGCTGTGGATGATTCAAATTCCGTGTGGAGAGAAGCTTTCTTGAAATCCTACAAGGCTATGGACAAGGAACTGAGATCTCATTCCAATTTAGACTGCTTTTGCAGTGGTAGCACTGCAGTTACTATAGTGAAACAAGGGTCCAATCTCTTCATAGGGAGTGTAGGAGATTCTCGAGCAATCCTCGGTTCCAAGAACGACCAGGATTCCATGATAGCAATCCCGTTAACTGTCGATCTAAAGCCTGATTTGCCGAGTGAAGCCGAGAGGATAAAAAGGTGTAGAGGAAGGGTGTTTGCAATGCGAGATGAGCCTCTGGTTCCAAGAGTATGGCTGCCGTTTGATGATGCTCCGGGGCTAGCAATGGCTCGAGCTTTTGGCGATTTCTGTTTGAAGAACTATGGAGTTATCTCCATTCCCGAGTTTTCCCACAGGAAACTTACTGATAGAGATCAATTTGTTGTTGTAGCCTCTGATGGGATTTGGGATGTGTTGAGCAATGAAGAGGTAGTTGAGATAGTGTCTTCTGCCTCCACCCGATCATCAGCTGCTAGAATATTGGTCGAGTCTGCAACTCATGGGTGGAGGCTCAAATACCCGACGTCGAATATGGATGATTGTGCAGTGGTTTGCTTGTTTTTGGACGGCAATATGGACCCTGAATCACATTGTGATGAACTTGGTTTTTCTTCTGCAACCATTCAAAGCAATAATTCTAGTAATGCCATGGAATCCAAGGATGGCCAGAAGTCGGACCCGTGTTTACAAAGAAACCACACAATCAGGTTCGCCAAAGAGAAGAATGAAGAAGTATTGGCTGAAGATCCGAACTGGTCCGGTTTGGAGGGCGTTACACGAGTAAACTCACTCGTACAACTTCCGAGATTTTTTGAGGAAAAATGTTGA 1326 45.4 MGVCVSTGIRASQNGRIRGKKVSQSCLEKSFGGQRRSKTTFSNDVIGLKQLFSIPNRVCINGKSRTSCLFTQKGRKGINQDTMIVWEDFISEGVTFCGVFDGHGPYGHLVAGKVMDSFPLKLLSFLHNSLSKKDDETEFHSAVDDSNSVWREAFLKSYKAMDKELRSHSNLDCFCSGSTAVTIVKQGSNLFIGSVGDSRAILGSKNDQDSMIAIPLTVDLKPDLPSEAERIKRCRGRVFAMRDEPLVPRVWLPFDDAPGLAMARAFGDFCLKNYGVISIPEFSHRKLTDRDQFVVVASDGIWDVLSNEEVVEIVSSASTRSSAARILVESATHGWRLKYPTSNMDDCAVVCLFLDGNMDPESHCDELGFSSATIQSNNSSNAMESKDGQKSDPCLQRNHTIRFAKEKNEEVLAEDPNWSGLEGVTRVNSLVQLPRFFEEKC 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 36747947 36749572 + Bma027875.1 Bma08g00589 87416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00589 441 SUPERFAMILY PP2C-like 59 356 IPR036457 -
Bma08g00589 441 CDD PP2Cc 65 354 IPR001932 -
Bma08g00589 441 ProSiteProfiles PPM-type phosphatase domain profile. 66 354 IPR001932 -
Bma08g00589 441 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 414 - -
Bma08g00589 441 SMART PP2C_4 55 352 IPR001932 -
Bma08g00589 441 Pfam Protein phosphatase 2C 96 325 IPR001932 -
Bma08g00589 441 Gene3D - 63 359 IPR036457 -
Bma08g00589 441 PANTHER ALPHABET, ISOFORM E-RELATED 1 414 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01365 Bma08g00589 CCT
Bma08g00589 Bma12g00748 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00594 Bma-Chr2:13543637 Bma08g00589 Bma-Chr8:36747947 3.40E-111 dispersed
Bma08g00589 Bma-Chr8:36747947 Bma13g00370 Bma-Chr13:6866969 6.33E-150 dispersed
Bma12g00748 Bma-Chr12:34361091 Bma08g00589 Bma-Chr8:36747947 0 wgd
Bma02g01365 Bma-Chr2:56054974 Bma08g00589 Bma-Chr8:36747947 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00589 - - rcu:8262108 639.417