Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma08g00610 | ATGGGTGTGAACATGGAAACTGCACAGTTTTTCAAACGAGATTTTGAAGAAAATGGATCAATGGAGAGAGTGACCCTTTTTCTGAATCTGGCTAACGATCCTACCATTGAGCGTATTATTACTCCTCGTATTGCTCTTACTACCGCGGAGTATTTGGCTTATGAATGTGGGAAGCACGTTCTTGTCATCTTGACTGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTGTCTGCTGCTCGGGAGGAAGTACCTGGAAGGCGTGGATATCCTGGTTATATGTATACTGATCTGGCCACAATATATGAGCGTGCAGGACGAATTGAAGGACGAAAAGGCTCCATCACCCAAATTCCAATTCTTACTATGCCTAATGATGATATCACGCATCCAACACCAGATCTTACAGGATATATCACCGAGGGGCAGATATACATTGATAGGCAGCTACATAACCGACAGATTTATCCACCAATCAACGTCCTGCCTTCATTATCTCGTCTCATGAAGAGTGCTATTGGCGAGGGAATGACTCGTAGGGATCATGCTGATGTATCCAATCAGCTCTATGCAAATTATGCAATTGGGAAGGATGTTCAGGCAATGAAAGCTGTGGTTGGAGAAGAAGCTCTTTCTTCTGAAGACCTGCTTTATCTGGAATTCTTGGACAAATTTGAGAGGAAGTTCGTCACACAAGGAGCCTACGACACCCGTAATATCTTCCAGTCACTCGATTTAGCGTGGACGTTGCTTAGAATTTTCCCCCGTGAGCTCCTCCACCGTATACCGGCAAAGACCCTCGATCAGTACTACAGCCGAGAAACCGCTAATTGA | 834 | 44.72 | MGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRETAN | 277 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 38513192 | 38514942 | - | Bma027915.1 | Bma08g00610 | 87437 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma08g00610 | 277 | CDD | ATP-synt_V_A-type_beta_C | 176 | 270 | - | - | |
Bma08g00610 | 277 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 172 | IPR027417 | - | |
Bma08g00610 | 277 | Gene3D | - | 1 | 277 | - | - | |
Bma08g00610 | 277 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT B | 1 | 277 | IPR022879 | - | |
Bma08g00610 | 277 | CDD | V_A-ATPase_B | 1 | 168 | - | - | |
Bma08g00610 | 277 | ProSitePatterns | ATP synthase alpha and beta subunits signature. | 157 | 166 | IPR020003 | GO:0005524 | |
Bma08g00610 | 277 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT B 1 | 1 | 277 | - | - | |
Bma08g00610 | 277 | Pfam | ATP synthase alpha/beta family, nucleotide-binding domain | 2 | 166 | IPR000194 | GO:0005524 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma03g00617 | Bma08g00610 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g00617 | Bma-Chr3:5093699 | Bma08g00610 | Bma-Chr8:38513192 | 0 | dispersed | |
Bma08g00610 | Bma-Chr8:38513192 | Bma09g01011 | Bma-Chr9:49562592 | 5.54E-22 | dispersed | |
Bma08g00610 | Bma-Chr8:38513192 | Bma15g00289 | Bma-Chr15:2842200 | 1.69E-23 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma08g00610 | K02147 | - | nnu:104603669 | 550.436 |