Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00610 ATGGGTGTGAACATGGAAACTGCACAGTTTTTCAAACGAGATTTTGAAGAAAATGGATCAATGGAGAGAGTGACCCTTTTTCTGAATCTGGCTAACGATCCTACCATTGAGCGTATTATTACTCCTCGTATTGCTCTTACTACCGCGGAGTATTTGGCTTATGAATGTGGGAAGCACGTTCTTGTCATCTTGACTGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTGTCTGCTGCTCGGGAGGAAGTACCTGGAAGGCGTGGATATCCTGGTTATATGTATACTGATCTGGCCACAATATATGAGCGTGCAGGACGAATTGAAGGACGAAAAGGCTCCATCACCCAAATTCCAATTCTTACTATGCCTAATGATGATATCACGCATCCAACACCAGATCTTACAGGATATATCACCGAGGGGCAGATATACATTGATAGGCAGCTACATAACCGACAGATTTATCCACCAATCAACGTCCTGCCTTCATTATCTCGTCTCATGAAGAGTGCTATTGGCGAGGGAATGACTCGTAGGGATCATGCTGATGTATCCAATCAGCTCTATGCAAATTATGCAATTGGGAAGGATGTTCAGGCAATGAAAGCTGTGGTTGGAGAAGAAGCTCTTTCTTCTGAAGACCTGCTTTATCTGGAATTCTTGGACAAATTTGAGAGGAAGTTCGTCACACAAGGAGCCTACGACACCCGTAATATCTTCCAGTCACTCGATTTAGCGTGGACGTTGCTTAGAATTTTCCCCCGTGAGCTCCTCCACCGTATACCGGCAAAGACCCTCGATCAGTACTACAGCCGAGAAACCGCTAATTGA 834 44.72 MGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRETAN 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 38513192 38514942 - Bma027915.1 Bma08g00610 87437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00610 277 CDD ATP-synt_V_A-type_beta_C 176 270 - -
Bma08g00610 277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 172 IPR027417 -
Bma08g00610 277 Gene3D - 1 277 - -
Bma08g00610 277 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 1 277 IPR022879 -
Bma08g00610 277 CDD V_A-ATPase_B 1 168 - -
Bma08g00610 277 ProSitePatterns ATP synthase alpha and beta subunits signature. 157 166 IPR020003 GO:0005524
Bma08g00610 277 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 1 1 277 - -
Bma08g00610 277 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 2 166 IPR000194 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00617 Bma08g00610 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00617 Bma-Chr3:5093699 Bma08g00610 Bma-Chr8:38513192 0 dispersed
Bma08g00610 Bma-Chr8:38513192 Bma09g01011 Bma-Chr9:49562592 5.54E-22 dispersed
Bma08g00610 Bma-Chr8:38513192 Bma15g00289 Bma-Chr15:2842200 1.69E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00610 K02147 - nnu:104603669 550.436