Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00611 GTAAACTCTCTGACTGCCTGTTTCCGGTCTCGGTCGGATGGAATAGTCGGTCCGGTAGCCGGATTCAGACAGGAAGGGCTGCTTTGGTACAAAGACATCGGACATCATCTGAACGGTGAGTTTTCAATGGCTGTAGTTCAAGCCAACAATTTACTCGAGGATCAGAGCCAGGTTGAGTCAGGAAGCTTGAGCTCTAATGATTCTGATCCGTATGGTGTATTTGTCGGCGTATACGACGGCCATGGAGGACCCGAGGCTTCCCGCTATCTAACCGATCACCTCTTACAACATCTCAAAAGGTTTGCTTCTGAGAGCCGCTCCATGTCTGTTGACGTAATTCGCAAGGCAATTCAAGCAACCGAGGAGGGTTTTACAGCTCTGGTCGCAGAACAATGGCCGATGAAACCGCGAATGGCAGCTGTTGGATCTTGCTGTCTCGTCGGGGTCATGTGCAGCGAATATCTTTACATCGCCAACCTCGGCGATTCTCGTGCTGTTTTGGGACGAGTTGTGAAAGCGACGGGGGAGGTTCTGTCGATTCAATTGTCAGCCGAGCACAATGCGAGTATAGAGTCTGTGAGACAAGAGCTGCAATCTTTGCATCCTGATGACTCGGAAATTGTCGTCTTGAAGCATAACGTTTGGCGCGTTAAGGGCCTCATTCAGATTTCTCGTTCTATTGGCGATGTGTATCTAAAAAACCCCAAGTTCAATTGCAAATCGTTCAATAAGCCGATTTTGAGCTCAGAACCTTCCATTTCCGTGGTTCGGTTGCAAGCAGACGATGTTGACGATCGATTTATTATATTTGCATCGGACGGCCTCTGGGAACACTTGACCAATCAGGAAGCAGTTGATATTGTTAAGAAACAACCACATAGTGGAAGTGCAAGGAGAGTGGTGAGAGCTGCTCTGCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCCGACTTGAAGAAGATTGATAGAGGGGTCCGGAGGCTTTTCCACGATGATATCACGGTGATTATCGTATTTCTCGACTCCGACCTGATTTCCCGGGCGTGCTCGGCAAAGGGCCCGACTATGTCGGCTAGAGGAGGTGGTCATCTCCCTCATAACACCTTGGCTCTGGTATCTGGTGGCACC 1131 49.07 VNSLTACFRSRSDGIVGPVAGFRQEGLLWYKDIGHHLNGEFSMAVVQANNLLEDQSQVESGSLSSNDSDPYGVFVGVYDGHGGPEASRYLTDHLLQHLKRFASESRSMSVDVIRKAIQATEEGFTALVAEQWPMKPRMAAVGSCCLVGVMCSEYLYIANLGDSRAVLGRVVKATGEVLSIQLSAEHNASIESVRQELQSLHPDDSEIVVLKHNVWRVKGLIQISRSIGDVYLKNPKFNCKSFNKPILSSEPSISVVRLQADDVDDRFIIFASDGLWEHLTNQEAVDIVKKQPHSGSARRVVRAALQEAAKKREMRYSDLKKIDRGVRRLFHDDITVIIVFLDSDLISRACSAKGPTMSARGGGHLPHNTLALVSGGT 377
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 38538594 38544981 - Bma031452 Bma08g00611 87438
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00611 377 Pfam Protein phosphatase 2C 61 311 IPR001932 -
Bma08g00611 377 SMART PP2C_4 32 339 IPR001932 -
Bma08g00611 377 CDD PP2Cc 41 341 IPR001932 -
Bma08g00611 377 ProSiteProfiles PPM-type phosphatase domain profile. 40 341 IPR001932 -
Bma08g00611 377 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 4 364 - -
Bma08g00611 377 SUPERFAMILY PP2C-like 49 342 IPR036457 -
Bma08g00611 377 Gene3D - 31 351 IPR036457 -
Bma08g00611 377 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Bma08g00611 377 PANTHER ALPHABET, ISOFORM E-RELATED 4 364 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bma08g00611 Bma12g00917 CCT
Bma03g00616 Bma08g00611 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00616 Bma-Chr3:5088697 Bma08g00611 Bma-Chr8:38538594 0 dispersed
Bma08g00611 Bma-Chr8:38538594 Bma12g00917 Bma-Chr12:40612620 0 dispersed
Bma08g00611 Bma-Chr8:38538594 Bma08g00745 Bma-Chr8:43881409 0 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00611 - K01102 nnu:104603663 551.592