Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00657 ATGGCTCAGTTACCTCCTAAAGTCCCAACCATGGCGTCCAATTGGCCGGAATTTTCCCACCAGAAGATACCCACAATGGTGGCCGGAGGAGGCTTTACGCCAAATGCACCAGCTCACCACCCTTCGTGGGTGGATGAGTTCCTAGACTTCTCTTCGTCAAGGCGCGGATCCCACCGCCGGTCTGTCAGCGATTCCATCGCATTTATGGAGATGCCCATGCTAGACGAATGCCGTGGCTCGGCGGCGAATCAGGATGTCGTGGACAACAACGAATTCGATAGATTTGATGACGAGCAATTCATGTCCATGTTTACTGACGAAATCTCATCAGCTGTGGCCCCCACTGTGTCCTCCTCGAATCCTTCTACGCCGTCCGATCACAACAGCGTCGACGAGGAGATAGAAGCCTTGCATAGCAACGACCAGAAGCAGAAGAAAAATGAATCGGAAGAGGTCCAAAGCCAATGCAAGTCGGAAAACCAAGCCCCAAACAGTGCAGTCGCCAGCGCCGCCCCCGATAGGATAACCGATCCCAAAAGGGTCAAAAGAATCTTGGCGAACAGGCAGTCAGCGCAAAGATCAAGAGTCAGGAAACTGCAGTACATATCAGAGTTGGAACGTAGCGTCACTTCACTACAAGCTGAAGTTTCAGTTTTATCGCCGCGGGTAGCGTTTCTCGACCACCAAAGATTGCTTCTAAACGTAGATAACAGTGCTCTTAAGCAACGGATCGCCGCTCTCGCCCAGGATAAGATTTTTAAAGATGCTCATCAAGAAGCATTGAAGAGAGAAATTGAAAGACTGAGGCAAGTGTATCACCAGCAGAATCTAAAGAAGATGGAGAATACTGATCATTCACCACCTTCTTCTGATTCACAGTCTGCAGCTGATAGAAAAGAAAACCTTCTTAACGCTTGA 918 49.35 MAQLPPKVPTMASNWPEFSHQKIPTMVAGGGFTPNAPAHHPSWVDEFLDFSSSRRGSHRRSVSDSIAFMEMPMLDECRGSAANQDVVDNNEFDRFDDEQFMSMFTDEISSAVAPTVSSSNPSTPSDHNSVDEEIEALHSNDQKQKKNESEEVQSQCKSENQAPNSAVASAAPDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNLKKMENTDHSPPSSDSQSAADRKENLLNA 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 40919178 40920793 - Bma027991.1 Bma08g00657 87484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00657 305 Coils Coil 258 278 - -
Bma08g00657 305 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 182 197 IPR004827 GO:0003700|GO:0006355
Bma08g00657 305 Gene3D - 178 277 - -
Bma08g00657 305 PANTHER BASIC LEUCINE ZIPPER 34 1 297 - -
Bma08g00657 305 MobiDBLite consensus disorder prediction 139 175 - -
Bma08g00657 305 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 229 IPR004827 GO:0003700|GO:0006355
Bma08g00657 305 MobiDBLite consensus disorder prediction 139 153 - -
Bma08g00657 305 PANTHER BASIC LEUCINE ZIPPER 61-LIKE 1 297 - -
Bma08g00657 305 Pfam Basic region leucine zipper 176 224 IPR004827 GO:0003700|GO:0006355
Bma08g00657 305 MobiDBLite consensus disorder prediction 273 305 - -
Bma08g00657 305 SMART brlzneu 175 239 IPR004827 GO:0003700|GO:0006355
Bma08g00657 305 SUPERFAMILY Leucine zipper domain 179 233 IPR046347 GO:0003700|GO:0006355
Bma08g00657 305 MobiDBLite consensus disorder prediction 281 305 - -
Bma08g00657 305 CDD bZIP_plant_RF2 180 230 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00657 Bma-Chr8:40919178 Bma15g00270 Bma-Chr15:2647853 2.78E-29 dispersed
Bma14g00263 Bma-Chr14:3091339 Bma08g00657 Bma-Chr8:40919178 2.23E-106 transposed
Bma03g00701 Bma-Chr3:6223941 Bma08g00657 Bma-Chr8:40919178 2.21E-179 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57756 PF07716 bZIP_2 3.50E-09 CL0018 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00657 - - qsu:112040072 410.609