Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma08g00703 | ATGGCGGACTACAAAGAGCCTGTATCTTCATTGAATAATCTAACAGAAGCGAGAATTGAAACTACAGAATTAGGATTAGAAATGAAGCCAGAAGCAGGAGAGGGAAGCGTCGGAGCCATAATACGAAACACGAAGAGAGAGCGGGAGGACGGAAATCGAAGCGAAAATGCAGAAGAGGGATCAGAATCGACTGAGAAATCACCGGGGGAGACGTCCCCTGCGTTTTCGCATGGGTTGAAAGACGCTTTGGCTGGGCTTCAACAAGCATTTGTTGTTTCCGACGCTACCAAACCAGACTGTCCTATTGTTTGCGCTAGTACTGGGTTTTTAACCATGACTGGCTACTCTTCAGAGGAAGTCATTGGAAGGAACTGTCGATTTCTGCAGGGCCCAGAGACAGACAAGAATGAAGTGGACAAAATCAGAGACGCCATTAAAAATGAAAAGAGCTACTGTGGAAGGCTCTTGAACTACAGGAAAAATGGCTCTTCTTTCTGGAACCTTCTCACCATCTCCCCCATCAGAGATGATCTTTGCAAAGTCATCTTATTTATTGGAATGCAGGTTGAGGTGAAAAAATTCGATGTGAAGGACAAGCCATTGCATCCAAATGAGTTGTCAAAGTCTCCAATTAGTCAGGGTACTTCTCAAAAGGAGAGTGTTTTGGGCTCAATTACAGAGGTTGTTCAGACTGAGCTTGCCTTTGTTTTGCCCGAGTCTGCTGAGGCTGACAATTTTAATAAGGACCATGGAGATGACTTTCCTCGGTCGAGGTCCTACGCTGATAGAGGCAAGATATCTAGATTATCACATAGCATTTCCTTTAAGGGGTCCATGTCTCTTAGCCTTCGAGGGAAATATAATCAACTCCCTGAAATCGAACGACATGTTTTGACGACCACGAATGTTCAACGTACCGAAAGTTTGGATTATTCTGAAAGAGAACCAGAAAGAAGGCAAGGAATTGATTTAGCAACCGCATTAGAGCGGTTTGAAAAGAATTTTGTGATTACAGATCCCAGACTTCCTGATAATCCGATTATATTTGCATCTGATAGCTTTCTTAGATTGACAGAATATTCGCGCAAAGAAATTTTGGGAAGAAACTGTCGATTTCTTCAAGGAGTTGAAACAGATCGAGCAACTGTCTCAAAGATAAGCGATGCTATCAGAGAACAGAAAGAAATTACTGTTCAATTGTTAAACTATACAAAGAGTGGTAAAAAGTTTTGGAATTTATTCCACTTGCAACCAATGCGCCATCAAAAGGGCGATCTCCAATACTTTATTGGTGTCCAACTTGATGTCAGCGGTTATGTAAATCCTTCGACGAAACTGCTGTCAGACAAAACAGAGCAGGAAAGTGTTTTTTTGGTCAAAAGTACCGCAGAAAAAGTGGACGAGGCTGTCAGAAAACTTCCTAATGCTCACTTGAGGCTGGAGGAATTGATGTTAATTTATTCTCAGCCAGTCTTCCCAAGGCCTCACAAGAAGGACACTCCTTCTTGGGTGGAAATACAAAAGATTACAGCACGCGGTGAGAAAATTGGGCTTCACCATTTTAAGCCAATTAAACCATTAGGATATGGAGACGCTGGAAGTGTACATCTGGTGGAATTGGAAGACACGCGCAAACTTTATGCAGTGAAAGCAATGAAAAAATCGATTCACCGAGCGTGCACCGAGAGGGAAATAATTTCACTTCTCGATCATCCTTTTCTTCCAACCTTGTACTCTTCATTTCAGACTCCGACACATTTTTGTTTGGTAACGGATTTTTATCCTGGCGGAGAGTTATTTGACTTGCTTGACAAGCAGCCAATGAAAATGTTTAACGAGGAATCTGCGAGATTTTATGCTGCAGAGGTTGTGGTTGGCTTGGAATACCTTCACTGTTTAGGGATTATTTATAGAGACCTGAAGCCTGAGAACATATTACTTCAGAAAGATGGTCATGTTGTATTGACTGACTTTGATTTATCATTAAATACATCATGTAGAATGCAGATTATGAATCTTCCTTCATCTAAAAGTAGGAGATATAAGAATCAAACACCGATGCTAGTTGTCAAACCAGTTTTGCAATCAAGTTCTTTTGTTGGAACTGAAGAGTACATAGCCCCTGAAATTATTGCCGGTACAGATCACACGAGCTCTATGGATTGGTGGTCTCTGGGTATTTTGTTGTATGAGATGCTCTATGGCTGTACCCCTTTCAAGGGAGAGGACAGGCAGGAGACATTTTCCAACATATTGCAGAAAGATGTTACATTTCCAAGTAGTATATTGGTAAGTCGAACTGCAAGACAGTTTATTAAAGCATTGCTGCGGAAAGACCCAGCTGATCGTTTAGGATCAAGTACTGGCGCCATTGAAATCAAACAACACCCTTTTTTCCAGAGAATCAATTGGCCACTTATCCGTTGCATGGTATTAATTCTTTCCCCTTCTTCAAATATAAAAGTTTTAAAATTTATTCTCGGTAGCTACCCTCTTATTCTTTATGTGCAGACTCCACCTCCATTAGAGGTACCTCTTCAGGTGGTCGAACGAGTTCAAAAGGCGAAAATCCAGACGAGGGAGGAACACCCTCTTGTGAGTCAACATCGTCGATGA | 2616 | 41.7 | MADYKEPVSSLNNLTEARIETTELGLEMKPEAGEGSVGAIIRNTKREREDGNRSENAEEGSESTEKSPGETSPAFSHGLKDALAGLQQAFVVSDATKPDCPIVCASTGFLTMTGYSSEEVIGRNCRFLQGPETDKNEVDKIRDAIKNEKSYCGRLLNYRKNGSSFWNLLTISPIRDDLCKVILFIGMQVEVKKFDVKDKPLHPNELSKSPISQGTSQKESVLGSITEVVQTELAFVLPESAEADNFNKDHGDDFPRSRSYADRGKISRLSHSISFKGSMSLSLRGKYNQLPEIERHVLTTTNVQRTESLDYSEREPERRQGIDLATALERFEKNFVITDPRLPDNPIIFASDSFLRLTEYSRKEILGRNCRFLQGVETDRATVSKISDAIREQKEITVQLLNYTKSGKKFWNLFHLQPMRHQKGDLQYFIGVQLDVSGYVNPSTKLLSDKTEQESVFLVKSTAEKVDEAVRKLPNAHLRLEELMLIYSQPVFPRPHKKDTPSWVEIQKITARGEKIGLHHFKPIKPLGYGDAGSVHLVELEDTRKLYAVKAMKKSIHRACTEREIISLLDHPFLPTLYSSFQTPTHFCLVTDFYPGGELFDLLDKQPMKMFNEESARFYAAEVVVGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSLNTSCRMQIMNLPSSKSRRYKNQTPMLVVKPVLQSSSFVGTEEYIAPEIIAGTDHTSSMDWWSLGILLYEMLYGCTPFKGEDRQETFSNILQKDVTFPSSILVSRTARQFIKALLRKDPADRLGSSTGAIEIKQHPFFQRINWPLIRCMVLILSPSSNIKVLKFILGSYPLILYVQTPPPLEVPLQVVERVQKAKIQTREEHPLVSQHRR | 871 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 42687325 | 42695280 | + | Bma028065.2 | Bma08g00703 | 87530 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma08g00703 | 871 | CDD | PAS | 335 | 436 | IPR000014 | - | |
Bma08g00703 | 871 | Pfam | Protein kinase domain | 523 | 799 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma08g00703 | 871 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 635 | 647 | IPR008271 | GO:0004672|GO:0006468 | |
Bma08g00703 | 871 | SUPERFAMILY | Protein kinase-like (PK-like) | 497 | 828 | IPR011009 | - | |
Bma08g00703 | 871 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 336 | 436 | IPR035965 | - | |
Bma08g00703 | 871 | Pfam | PAS domain | 343 | 437 | IPR000014 | - | |
Bma08g00703 | 871 | Pfam | PAS domain | 96 | 189 | IPR000014 | - | |
Bma08g00703 | 871 | PANTHER | FLIPPASE KINASE 1-RELATED | 36 | 809 | - | - | |
Bma08g00703 | 871 | Gene3D | PAS domain | 309 | 473 | - | - | |
Bma08g00703 | 871 | Gene3D | Phosphorylase Kinase; domain 1 | 520 | 597 | - | - | |
Bma08g00703 | 871 | ProSiteProfiles | PAS repeat profile. | 79 | 148 | IPR000014 | - | |
Bma08g00703 | 871 | ProSiteProfiles | Protein kinase domain profile. | 521 | 799 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma08g00703 | 871 | ProSiteProfiles | PAC domain profile. | 394 | 448 | IPR000700 | - | |
Bma08g00703 | 871 | MobiDBLite | consensus disorder prediction | 22 | 77 | - | - | |
Bma08g00703 | 871 | Gene3D | Transferase(Phosphotransferase) domain 1 | 598 | 806 | - | - | |
Bma08g00703 | 871 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 96 | 188 | IPR035965 | - | |
Bma08g00703 | 871 | CDD | STKc_phototropin_like | 519 | 810 | - | - | |
Bma08g00703 | 871 | TIGRFAM | sensory_box: PAS domain S-box protein | 345 | 437 | IPR000014 | - | |
Bma08g00703 | 871 | TIGRFAM | sensory_box: PAS domain S-box protein | 102 | 186 | IPR000014 | - | |
Bma08g00703 | 871 | Gene3D | PAS domain | 89 | 249 | - | - | |
Bma08g00703 | 871 | SMART | serkin_6 | 521 | 799 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma08g00703 | 871 | CDD | PAS | 105 | 191 | IPR000014 | - | |
Bma08g00703 | 871 | MobiDBLite | consensus disorder prediction | 41 | 65 | - | - | |
Bma08g00703 | 871 | SMART | pac_2 | 152 | 194 | IPR001610 | - | |
Bma08g00703 | 871 | SMART | pac_2 | 397 | 439 | IPR001610 | - | |
Bma08g00703 | 871 | ProSiteProfiles | PAC domain profile. | 149 | 203 | IPR000700 | - | |
Bma08g00703 | 871 | PANTHER | BNAA02G07840D PROTEIN | 36 | 809 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma08g00703 | Bma12g00892 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma08g00703 | Bma-Chr8:42687325 | Bma12g00892 | Bma-Chr12:40248529 | 0 | dispersed | |
Bma08g00703 | Bma-Chr8:42687325 | Bma11g00144 | Bma-Chr11:1284540 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66667 | PF00069 | Pkinase | 2.30E-61 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma08g00703 | K20715 | - | jre:108997379 | 1028.47 |