Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00703 ATGGCGGACTACAAAGAGCCTGTATCTTCATTGAATAATCTAACAGAAGCGAGAATTGAAACTACAGAATTAGGATTAGAAATGAAGCCAGAAGCAGGAGAGGGAAGCGTCGGAGCCATAATACGAAACACGAAGAGAGAGCGGGAGGACGGAAATCGAAGCGAAAATGCAGAAGAGGGATCAGAATCGACTGAGAAATCACCGGGGGAGACGTCCCCTGCGTTTTCGCATGGGTTGAAAGACGCTTTGGCTGGGCTTCAACAAGCATTTGTTGTTTCCGACGCTACCAAACCAGACTGTCCTATTGTTTGCGCTAGTACTGGGTTTTTAACCATGACTGGCTACTCTTCAGAGGAAGTCATTGGAAGGAACTGTCGATTTCTGCAGGGCCCAGAGACAGACAAGAATGAAGTGGACAAAATCAGAGACGCCATTAAAAATGAAAAGAGCTACTGTGGAAGGCTCTTGAACTACAGGAAAAATGGCTCTTCTTTCTGGAACCTTCTCACCATCTCCCCCATCAGAGATGATCTTTGCAAAGTCATCTTATTTATTGGAATGCAGGTTGAGGTGAAAAAATTCGATGTGAAGGACAAGCCATTGCATCCAAATGAGTTGTCAAAGTCTCCAATTAGTCAGGGTACTTCTCAAAAGGAGAGTGTTTTGGGCTCAATTACAGAGGTTGTTCAGACTGAGCTTGCCTTTGTTTTGCCCGAGTCTGCTGAGGCTGACAATTTTAATAAGGACCATGGAGATGACTTTCCTCGGTCGAGGTCCTACGCTGATAGAGGCAAGATATCTAGATTATCACATAGCATTTCCTTTAAGGGGTCCATGTCTCTTAGCCTTCGAGGGAAATATAATCAACTCCCTGAAATCGAACGACATGTTTTGACGACCACGAATGTTCAACGTACCGAAAGTTTGGATTATTCTGAAAGAGAACCAGAAAGAAGGCAAGGAATTGATTTAGCAACCGCATTAGAGCGGTTTGAAAAGAATTTTGTGATTACAGATCCCAGACTTCCTGATAATCCGATTATATTTGCATCTGATAGCTTTCTTAGATTGACAGAATATTCGCGCAAAGAAATTTTGGGAAGAAACTGTCGATTTCTTCAAGGAGTTGAAACAGATCGAGCAACTGTCTCAAAGATAAGCGATGCTATCAGAGAACAGAAAGAAATTACTGTTCAATTGTTAAACTATACAAAGAGTGGTAAAAAGTTTTGGAATTTATTCCACTTGCAACCAATGCGCCATCAAAAGGGCGATCTCCAATACTTTATTGGTGTCCAACTTGATGTCAGCGGTTATGTAAATCCTTCGACGAAACTGCTGTCAGACAAAACAGAGCAGGAAAGTGTTTTTTTGGTCAAAAGTACCGCAGAAAAAGTGGACGAGGCTGTCAGAAAACTTCCTAATGCTCACTTGAGGCTGGAGGAATTGATGTTAATTTATTCTCAGCCAGTCTTCCCAAGGCCTCACAAGAAGGACACTCCTTCTTGGGTGGAAATACAAAAGATTACAGCACGCGGTGAGAAAATTGGGCTTCACCATTTTAAGCCAATTAAACCATTAGGATATGGAGACGCTGGAAGTGTACATCTGGTGGAATTGGAAGACACGCGCAAACTTTATGCAGTGAAAGCAATGAAAAAATCGATTCACCGAGCGTGCACCGAGAGGGAAATAATTTCACTTCTCGATCATCCTTTTCTTCCAACCTTGTACTCTTCATTTCAGACTCCGACACATTTTTGTTTGGTAACGGATTTTTATCCTGGCGGAGAGTTATTTGACTTGCTTGACAAGCAGCCAATGAAAATGTTTAACGAGGAATCTGCGAGATTTTATGCTGCAGAGGTTGTGGTTGGCTTGGAATACCTTCACTGTTTAGGGATTATTTATAGAGACCTGAAGCCTGAGAACATATTACTTCAGAAAGATGGTCATGTTGTATTGACTGACTTTGATTTATCATTAAATACATCATGTAGAATGCAGATTATGAATCTTCCTTCATCTAAAAGTAGGAGATATAAGAATCAAACACCGATGCTAGTTGTCAAACCAGTTTTGCAATCAAGTTCTTTTGTTGGAACTGAAGAGTACATAGCCCCTGAAATTATTGCCGGTACAGATCACACGAGCTCTATGGATTGGTGGTCTCTGGGTATTTTGTTGTATGAGATGCTCTATGGCTGTACCCCTTTCAAGGGAGAGGACAGGCAGGAGACATTTTCCAACATATTGCAGAAAGATGTTACATTTCCAAGTAGTATATTGGTAAGTCGAACTGCAAGACAGTTTATTAAAGCATTGCTGCGGAAAGACCCAGCTGATCGTTTAGGATCAAGTACTGGCGCCATTGAAATCAAACAACACCCTTTTTTCCAGAGAATCAATTGGCCACTTATCCGTTGCATGGTATTAATTCTTTCCCCTTCTTCAAATATAAAAGTTTTAAAATTTATTCTCGGTAGCTACCCTCTTATTCTTTATGTGCAGACTCCACCTCCATTAGAGGTACCTCTTCAGGTGGTCGAACGAGTTCAAAAGGCGAAAATCCAGACGAGGGAGGAACACCCTCTTGTGAGTCAACATCGTCGATGA 2616 41.7 MADYKEPVSSLNNLTEARIETTELGLEMKPEAGEGSVGAIIRNTKREREDGNRSENAEEGSESTEKSPGETSPAFSHGLKDALAGLQQAFVVSDATKPDCPIVCASTGFLTMTGYSSEEVIGRNCRFLQGPETDKNEVDKIRDAIKNEKSYCGRLLNYRKNGSSFWNLLTISPIRDDLCKVILFIGMQVEVKKFDVKDKPLHPNELSKSPISQGTSQKESVLGSITEVVQTELAFVLPESAEADNFNKDHGDDFPRSRSYADRGKISRLSHSISFKGSMSLSLRGKYNQLPEIERHVLTTTNVQRTESLDYSEREPERRQGIDLATALERFEKNFVITDPRLPDNPIIFASDSFLRLTEYSRKEILGRNCRFLQGVETDRATVSKISDAIREQKEITVQLLNYTKSGKKFWNLFHLQPMRHQKGDLQYFIGVQLDVSGYVNPSTKLLSDKTEQESVFLVKSTAEKVDEAVRKLPNAHLRLEELMLIYSQPVFPRPHKKDTPSWVEIQKITARGEKIGLHHFKPIKPLGYGDAGSVHLVELEDTRKLYAVKAMKKSIHRACTEREIISLLDHPFLPTLYSSFQTPTHFCLVTDFYPGGELFDLLDKQPMKMFNEESARFYAAEVVVGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSLNTSCRMQIMNLPSSKSRRYKNQTPMLVVKPVLQSSSFVGTEEYIAPEIIAGTDHTSSMDWWSLGILLYEMLYGCTPFKGEDRQETFSNILQKDVTFPSSILVSRTARQFIKALLRKDPADRLGSSTGAIEIKQHPFFQRINWPLIRCMVLILSPSSNIKVLKFILGSYPLILYVQTPPPLEVPLQVVERVQKAKIQTREEHPLVSQHRR 871
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 42687325 42695280 + Bma028065.2 Bma08g00703 87530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00703 871 CDD PAS 335 436 IPR000014 -
Bma08g00703 871 Pfam Protein kinase domain 523 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00703 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Bma08g00703 871 SUPERFAMILY Protein kinase-like (PK-like) 497 828 IPR011009 -
Bma08g00703 871 SUPERFAMILY PYP-like sensor domain (PAS domain) 336 436 IPR035965 -
Bma08g00703 871 Pfam PAS domain 343 437 IPR000014 -
Bma08g00703 871 Pfam PAS domain 96 189 IPR000014 -
Bma08g00703 871 PANTHER FLIPPASE KINASE 1-RELATED 36 809 - -
Bma08g00703 871 Gene3D PAS domain 309 473 - -
Bma08g00703 871 Gene3D Phosphorylase Kinase; domain 1 520 597 - -
Bma08g00703 871 ProSiteProfiles PAS repeat profile. 79 148 IPR000014 -
Bma08g00703 871 ProSiteProfiles Protein kinase domain profile. 521 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00703 871 ProSiteProfiles PAC domain profile. 394 448 IPR000700 -
Bma08g00703 871 MobiDBLite consensus disorder prediction 22 77 - -
Bma08g00703 871 Gene3D Transferase(Phosphotransferase) domain 1 598 806 - -
Bma08g00703 871 SUPERFAMILY PYP-like sensor domain (PAS domain) 96 188 IPR035965 -
Bma08g00703 871 CDD STKc_phototropin_like 519 810 - -
Bma08g00703 871 TIGRFAM sensory_box: PAS domain S-box protein 345 437 IPR000014 -
Bma08g00703 871 TIGRFAM sensory_box: PAS domain S-box protein 102 186 IPR000014 -
Bma08g00703 871 Gene3D PAS domain 89 249 - -
Bma08g00703 871 SMART serkin_6 521 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00703 871 CDD PAS 105 191 IPR000014 -
Bma08g00703 871 MobiDBLite consensus disorder prediction 41 65 - -
Bma08g00703 871 SMART pac_2 152 194 IPR001610 -
Bma08g00703 871 SMART pac_2 397 439 IPR001610 -
Bma08g00703 871 ProSiteProfiles PAC domain profile. 149 203 IPR000700 -
Bma08g00703 871 PANTHER BNAA02G07840D PROTEIN 36 809 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma08g00703 Bma12g00892 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00703 Bma-Chr8:42687325 Bma12g00892 Bma-Chr12:40248529 0 dispersed
Bma08g00703 Bma-Chr8:42687325 Bma11g00144 Bma-Chr11:1284540 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66667 PF00069 Pkinase 2.30E-61 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00703 K20715 - jre:108997379 1028.47