Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00712 ATGAAGGGGGTGGAGAGGAGAAGGCTCATGGAGGAGTTTTCACCTGGGTATTATGGTCTCTGCGCTGTTGGAGGAATGCTTAGTGCTGGGACTACCCATCTCGCTATTACCCCCTTCGACGTTCTCAAAGTTAATATGCAGGTAAATCCCATCAAGTATAGCAGTATTTCTTCTGGTTTGTCAACCCTTTTGAAAGAACAAGGTCCTTCATTCCTTTGGAGGGGTTGGTCTGGCAAGTTGTTCGGATATGGTGTTCAAGGCGGCTTCAAATTTGGCTTCTATGAGTACTTCAAGAAGCTTTATTCTGATCTACTTCCAGATTATAGTAGGAGTTCCATCTTCTTTCTTAGCAGCGCCTCTGCTCAAGTATTTGCGGATGTAGCTCTTTGTCCTTTCGAAGCTGTCAAAGTCCGCGTTCAAGCACAACCCCATTACGCCAAGGGGTTGATCGATGGGTTCCCAAAACTATACTCTAGTGAAGGTGTTTCGGGTTTCTACAGGGGAATTTTACCACTTTGGGGTCGAAATCTTCCGTTCTCCATGATTATGTTCTCGACATTCGAGCATTCTGTGGCGTTTATATATAGTAACATCATTCAACGTAGAAAAGAAGATTGCTCAAGAGCCCAACAGCTTGGCTCCACATGTTTCGCTGGCTATGTAGCCGGAGCTGTTGCTTCTGTTGCCTCTAACCCTGCTGATAACATTGTTTCCACTCTTTATAACAAGAAGGCTAACAACGTCATGCAGGTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTATTTGAAACTATAATATATTCATGCAGGCTCTGA 822 44.53 MKGVERRRLMEEFSPGYYGLCAVGGMLSAGTTHLAITPFDVLKVNMQVNPIKYSSISSGLSTLLKEQGPSFLWRGWSGKLFGYGVQGGFKFGFYEYFKKLYSDLLPDYSRSSIFFLSSASAQVFADVALCPFEAVKVRVQAQPHYAKGLIDGFPKLYSSEGVSGFYRGILPLWGRNLPFSMIMFSTFEHSVAFIYSNIIQRRKEDCSRAQQLGSTCFAGYVAGAVASVASNPADNIVSTLYNKKANNVMQVLSLSLSLSLSHLFETIIYSCRL 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 42913636 42915459 - Bma028074.1 Bma08g00712 87539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00712 273 Gene3D Mitochondrial carrier domain 21 266 IPR023395 -
Bma08g00712 273 ProSiteProfiles Solute carrier (Solcar) repeat profile. 16 100 IPR018108 -
Bma08g00712 273 Pfam Mitochondrial carrier protein 115 195 IPR018108 -
Bma08g00712 273 Pfam Mitochondrial carrier protein 22 102 IPR018108 -
Bma08g00712 273 PANTHER MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN 1, MITOCHONDRIAL 5 252 - -
Bma08g00712 273 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 5 252 IPR044677 GO:0005315|GO:1990547
Bma08g00712 273 SUPERFAMILY Mitochondrial carrier 20 246 IPR023395 -
Bma08g00712 273 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 193 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00281 Bma-Chr6:3948710 Bma08g00712 Bma-Chr8:42913636 4.13E-85 dispersed
Bma08g00712 Bma-Chr8:42913636 Bma07g00041 Bma-Chr7:1332196 1.87E-06 dispersed
Bma08g00712 Bma-Chr8:42913636 Bma07g01583 Bma-Chr7:51132075 4.80E-17 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00712 K15102 - csv:101219895 414.075