Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00734 ATGGCTTGGTTTCTCTGCTTTCTCTTCTTTCTATTTTCGTCTGTTACTGCTTGCGATCGCTGCGTTCATAAATCCAGAGCTGCTTATTTCTCTAAAGCTTCAGCTCTTTCGGTTGGAGCTTGTGGATATGGCTCGTTGGCATTGGGCTTTAACAGTGGACACCTTGCTGCTGGTGTGCCTACCCTTTACAAAGAAGGAGCTGGCTGTGGCGCTTGCTTTCAGATAAGATGCAAGAACACCAATCTCTGCTCAAGAACGGGAACTAAAGTGATTTTGACGGATCTCAACACAGATAACCAAACAGATTTTGTTCTGAGTAGCAGAGCCTTTGCTGCAATGGCTCAAAAGGGTATGGACAAGGACATTCTGAAACGAGGAATTGTCGACGTCGAATACAAGAGGGTACCATGCGAGTATAAAAATCAAAACTTGGGCGTGCGAGTGGAAGAATCAAGCAAAAAACCATATTATCTAGCAATCAAATTCCTAAACCAAGGCGGCCAAACAGAAATAGTAGGCGTTGATGTAGCTCGGGTGGGTTCGTCAAATTGGAGCTTCCTGAGTAGAAACCATGGCGCAGTGTGGGATACAAGTAGAGTACCAGACGGAGCCCTGCAATTTCGAATGGTGGTGACTTCTGGGTACGATGGAAAATGGATTTGGGCGAAGAGTAGTGTTCTTCCAGAAGACTGGAAATCAGGCGTCACTTATGATTCTGGCGTTCAAATCGATGACATTGCACAGGAGGGTTGCTTTCCTTGCGACGAAGGACATTGGAAATGA 783 45.72 MAWFLCFLFFLFSSVTACDRCVHKSRAAYFSKASALSVGACGYGSLALGFNSGHLAAGVPTLYKEGAGCGACFQIRCKNTNLCSRTGTKVILTDLNTDNQTDFVLSSRAFAAMAQKGMDKDILKRGIVDVEYKRVPCEYKNQNLGVRVEESSKKPYYLAIKFLNQGGQTEIVGVDVARVGSSNWSFLSRNHGAVWDTSRVPDGALQFRMVVTSGYDGKWIWAKSSVLPEDWKSGVTYDSGVQIDDIAQEGCFPCDEGHWK 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43266477 43268032 - Bma028101.1 Bma08g00734 87561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00734 260 Pfam Expansin C-terminal domain 146 223 IPR007117 -
Bma08g00734 260 PRINTS Expansin/Lol pI family signature 225 239 IPR007118 GO:0005576
Bma08g00734 260 PRINTS Expansin/Lol pI family signature 184 198 IPR007118 GO:0005576
Bma08g00734 260 PRINTS Expansin/Lol pI family signature 37 55 IPR007118 GO:0005576
Bma08g00734 260 PRINTS Expansin/Lol pI family signature 125 141 IPR007118 GO:0005576
Bma08g00734 260 PRINTS Expansin/Lol pI family signature 59 77 IPR007118 GO:0005576
Bma08g00734 260 PANTHER EXPANSIN-LIKE A1-RELATED 5 256 - -
Bma08g00734 260 SUPERFAMILY PHL pollen allergen 142 239 IPR036749 -
Bma08g00734 260 SUPERFAMILY Barwin-like endoglucanases 6 141 IPR036908 -
Bma08g00734 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 38 142 IPR007112 -
Bma08g00734 260 Gene3D - 139 243 IPR036749 -
Bma08g00734 260 SMART dpbb_1 56 132 IPR007112 -
Bma08g00734 260 Pfam Lytic transglycolase 56 132 IPR009009 -
Bma08g00734 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 156 239 IPR007117 -
Bma08g00734 260 PANTHER EXPANSIN-B3 5 256 - -
Bma08g00734 260 Gene3D - 12 138 IPR036908 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00734 Bma-Chr8:43266477 Bma14g00644 Bma-Chr14:6941482 1.93E-56 dispersed
Bma03g00630 Bma-Chr3:5187959 Bma08g00734 Bma-Chr8:43266477 3.43E-160 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00734 - - twl:120001429 429.483