Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00742 CTGATGGTGATGGACGACAACGAGAGCTGCGGTAGTAGAGCCCACGACGCCTCTTCTCCGGCTCAGACTCGCCTGAACAGGAGGAAGCTCGAGGTCTACAATGAGGTTCTGCGTCGTCTGAAGAACTCAGACAACCAGGAGGCTGTTCTGCCTAGTTTTGACGATGAGCTTTGGACTCACTTCAATCGCCTCCCCGCTCGGTATGCCCTTGATGTAAATGTGGAGAGGGCAGAGGATGTTCTTATGCATAAACGACTACTGCATTTAGCTCATGATCCTGAAAATAGACCTGCAATTGAAGTCCGACTGGTCCAGATGCAGTCTCTTACTGATGGGAATTCTGCTGAGTTTACCAAGGCTAGTAAAGATGCTGCCCAAAGTTCTTCAAATTTCTTTAGCAGACAGAGCATACACCCTCCTCCTGCCTTTGGTTCATCTCCTAACCTTGAAGGACTCGCACTTGAAGCTGATCAACTTCATGATTATGATGAGGAGCACTCTGTCCATGCCAGGACACAATTTTCCAGGCCGATGCACGAGATCACCTTCTCGTTGACTTCATTGCTTGCTGAGATTGGGCTGAACATTCAAGAAGCACATGCATTTTCAACAATAGATGGTTACTCCTTAGATGTCTTTGTTGTTGATGGTTGGCCATATGAGGAAACCGAGCAGCTCAAAACTGCTCTAGAAAAGGAAGTGTTGAAGTTTGAGAGGAAGGATTGGCCAAATCATCAATCAATTTCTCCAGTGGGCGAGGATGATAAATTTGTCGTTAAATGTGAACCTGATCATGTAAGGATACCAACTGATGGGACTGATGTATGGGAAATCGATCCTAGATATTTGAGATTCGAGCATAAAGTTGCATCTGGATCATATGGTGATTTGTACAAAGGTACATACTGCAGCCAAGAAGTGGCTATTAAAGTCCTGAAACCTGAACGCCTAAATTCTGATATGCAACGAGATTTTGCTCAAGAAGTCTTTATTATGAGGAAAGTTAGGCACAAAAACGTTGTACAGTTTATAGGTGCATGTACCAAGCCTCCAAGGCTTAGCATTGTGACAGAGTTTATGTCTGGTGGAAGTGTGTATGACTACTTACATAAACAAAAAGGCATTTTTAAGCTTCCATCCTTACTCAAGGTAGCAATCGATGTCTCCAAAGGAATGAATTACTTGCACCAAAATAATATAATCCACAGAGATCTGAAGGCTGCCAACCTTTTGATGGATGAGAACGAAGTAAGAATTTTCCTTAGTTTGTCATTCTTGTACATTGAAAAAAAATATATCATTTGGTATAATATTTCTCAGGTCGTTAAGGTTGCGGATTTTGGAGTTGCTAGAGTAAAAGTACAGTCAGGAGTTATGACAGCTGAAACTGGGACATACCGATGGATGGCTCCAGAGGTAATAGAACACAAACCCTATGATCATAAGGCTGATGTTTTCAGTTTTGGAATTGTATTGTGGGAGTTACTGACTGGAAAGCTTCCTTATGAATACTTAACCCCTTTACAAGCTGCCGTTGGTGTGGTTCAAAAGAGTATAAGGCCTACTATTCCAAAGAACACTCATCCAAAGCTAGTTAACTTAATGGAGATGTGCTGGCAACAAGATCCAGCAGCAAGACCTGACTTTTCAGAAATCTTGTCAATATTGCTGCAATTAGCCAAGGAGGTTGGAGATGATGGAGATGAACGGCGCAAGGAAAAATCTACCGGAGGAATTCTATCAATTCTGAGGCGAAATCATATCTAG 1767 42.61 LMVMDDNESCGSRAHDASSPAQTRLNRRKLEVYNEVLRRLKNSDNQEAVLPSFDDELWTHFNRLPARYALDVNVERAEDVLMHKRLLHLAHDPENRPAIEVRLVQMQSLTDGNSAEFTKASKDAAQSSSNFFSRQSIHPPPAFGSSPNLEGLALEADQLHDYDEEHSVHARTQFSRPMHEITFSLTSLLAEIGLNIQEAHAFSTIDGYSLDVFVVDGWPYEETEQLKTALEKEVLKFERKDWPNHQSISPVGEDDKFVVKCEPDHVRIPTDGTDVWEIDPRYLRFEHKVASGSYGDLYKGTYCSQEVAIKVLKPERLNSDMQRDFAQEVFIMRKVRHKNVVQFIGACTKPPRLSIVTEFMSGGSVYDYLHKQKGIFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVRIFLSLSFLYIEKKYIIWYNISQVVKVADFGVARVKVQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKSIRPTIPKNTHPKLVNLMEMCWQQDPAARPDFSEILSILLQLAKEVGDDGDERRKEKSTGGILSILRRNHI 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43584343 43590221 + Bma028113.2 Bma08g00742 87569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00742 588 SUPERFAMILY Protein kinase-like (PK-like) 269 556 IPR011009 -
Bma08g00742 588 MobiDBLite consensus disorder prediction 128 142 - -
Bma08g00742 588 Coils Coil 220 240 - -
Bma08g00742 588 Pfam Protein tyrosine and serine/threonine kinase 283 555 IPR001245 GO:0004672|GO:0006468
Bma08g00742 588 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 14 415 - -
Bma08g00742 588 SUPERFAMILY ACT-like 181 233 IPR045865 -
Bma08g00742 588 SMART serkin_6 283 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00742 588 Gene3D Phosphorylase Kinase; domain 1 273 361 - -
Bma08g00742 588 MobiDBLite consensus disorder prediction 1 23 - -
Bma08g00742 588 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 14 415 - -
Bma08g00742 588 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 439 569 - -
Bma08g00742 588 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 439 569 - -
Bma08g00742 588 CDD STKc_MAP3K-like 289 556 - -
Bma08g00742 588 MobiDBLite consensus disorder prediction 128 149 - -
Bma08g00742 588 ProSiteProfiles Protein kinase domain profile. 283 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00742 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
Bma08g00742 588 Gene3D Transferase(Phosphotransferase) domain 1 362 579 - -
Bma08g00742 588 PRINTS Tyrosine kinase catalytic domain signature 357 370 IPR001245 GO:0004672|GO:0006468
Bma08g00742 588 PRINTS Tyrosine kinase catalytic domain signature 527 549 IPR001245 GO:0004672|GO:0006468
Bma08g00742 588 PRINTS Tyrosine kinase catalytic domain signature 464 474 IPR001245 GO:0004672|GO:0006468
Bma08g00742 588 PRINTS Tyrosine kinase catalytic domain signature 483 505 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma08g00742 Bma12g00909 CCT
Bma03g00620 Bma08g00742 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02388 Bma-Chr1:81458040 Bma08g00742 Bma-Chr8:43584343 0 dispersed
Bma02g00714 Bma-Chr2:29988319 Bma08g00742 Bma-Chr8:43584343 0 dispersed
Bma06g00081 Bma-Chr6:1282980 Bma08g00742 Bma-Chr8:43584343 2.86E-17 dispersed
Bma12g00909 Bma-Chr12:40538335 Bma08g00742 Bma-Chr8:43584343 0 wgd
Bma03g00620 Bma-Chr3:5114687 Bma08g00742 Bma-Chr8:43584343 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66671 PF07714 PK_Tyr_Ser-Thr 1.80E-69 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00742 - - csv:101213048 904.82