Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00745 ATGTTATCGAAATTAGTAAACTCTCTGACTGCCTGTTTCCGGTCTCGGTCGGATGGAATAGTCGGTCCGGTAGCCGGATTCAGACAGGAAGGGCTGCTTTGGTACAAAGACATCGGACATCATCTGAACGGTGAGTTTTCAATGGCTGTAGTTCAAGCCAACAATTTACTCGAGGATCAGAGCCAGGTTGAGTCAGGAAGCTTGAGCTCTAATGATTCTGATCCGTATGGTGTATTTGTCGGCGTATACGACGGCCATGGAGGACCCGAGGCTTCTCGCTATCTAACCGATCACCTCTTACAACATCTCAAAAGGTTTGCTTCTGAGAGCCGCTCCATGTCTGTTGACGTAATTCGCAAGGCAATTCAAGCAACCGAGGAGGGTTTTACAGCTCTGGTCGCAGAACAATGGCCGATGAAACCGCGAATGGCAGCTGTTGGATCTTGCTGTCTCGTCGGGGTCATATGCAGCGAATATCTTTACATCGCCAACCTCGGCGATTCTCGTGCTGTTTTGGGACGAGTTGTGAAAGCGACGGGGGAGGTTCTGTCGATTCAATTGTCAGCCGAGCACAATGCGAGTATAGAGTCTGTGAGACAAGAGCTGCAATCTTTGCATCCTGATGACTCGGAAATTGTCGTCTTGAAGCATAACGTTTGGCGCGTTAAGGGCCTGATTCAGATTTCTCGTTCTATTGGCGATGTGTATCTAAAAAACCCCAAGTTCAATTGCAAATCGTTCAATAAGCCGATTTTGAGCTCAGAACCTTCCATTTCCGTGGTTCGGTTGCAAGCAGACGATCGATTTATTATATTTGCATCGGACGGCCTCTGGGAACACTTGACCAATCAGGAAGCAGTTGATATTGTTAAGAAACAACCACATAGTGGAAGTGCAAGGAGAGTGGTGAGAGCTGCTCTGCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCCGACTTGAAGAAGATCGATAGAGGGGTCCGGAGGCTTTTCCACGATGATATCACGGTGATTATCGTATTTCTCGACTCCAACCTGATTTCCCGGGCGTGCTCGGCAAAGGGCCCGACTGTGTTGGCGAGAGGAGGTGGAATTCATCTCCCTCATAACACCTTGGCTCTGGTATCTGGCGGCACCTGA 1143 48.56 MLSKLVNSLTACFRSRSDGIVGPVAGFRQEGLLWYKDIGHHLNGEFSMAVVQANNLLEDQSQVESGSLSSNDSDPYGVFVGVYDGHGGPEASRYLTDHLLQHLKRFASESRSMSVDVIRKAIQATEEGFTALVAEQWPMKPRMAAVGSCCLVGVICSEYLYIANLGDSRAVLGRVVKATGEVLSIQLSAEHNASIESVRQELQSLHPDDSEIVVLKHNVWRVKGLIQISRSIGDVYLKNPKFNCKSFNKPILSSEPSISVVRLQADDRFIIFASDGLWEHLTNQEAVDIVKKQPHSGSARRVVRAALQEAAKKREMRYSDLKKIDRGVRRLFHDDITVIIVFLDSNLISRACSAKGPTVLARGGGIHLPHNTLALVSGGT 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43881409 43883054 - Bma028118.1 Bma08g00745 87572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00745 380 Pfam Protein phosphatase 2C 66 313 IPR001932 -
Bma08g00745 380 Gene3D - 36 353 IPR036457 -
Bma08g00745 380 ProSiteProfiles PPM-type phosphatase domain profile. 45 343 IPR001932 -
Bma08g00745 380 PANTHER ALPHABET, ISOFORM E-RELATED 7 373 - -
Bma08g00745 380 CDD PP2Cc 46 343 IPR001932 -
Bma08g00745 380 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 7 373 - -
Bma08g00745 380 SUPERFAMILY PP2C-like 54 344 IPR036457 -
Bma08g00745 380 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Bma08g00745 380 SMART PP2C_4 37 341 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00745 Bma-Chr8:43881409 Bma08g00966 Bma-Chr8:48642062 1.42E-163 dispersed
Bma08g00611 Bma-Chr8:38538594 Bma08g00745 Bma-Chr8:43881409 0 transposed
Bma12g00917 Bma-Chr12:40612620 Bma08g00745 Bma-Chr8:43881409 0 wgd
Bma03g00616 Bma-Chr3:5088697 Bma08g00745 Bma-Chr8:43881409 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00745 - K01102 jre:109006616 570.852