Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00785 ATGGGGGAGAGGCGTGGAGGATGCTGTCCGCCTATGGATCTCTTCCGCTCCGAACCGATGCAGCTTGTGCAGCTCATCATCCCCATCGAGTCCGCTCACCTAACCGTCTCTTATTTAGGAGACCTCGGCCTCCTCCAGTTCAAAGATCTCAATTCAGAGAAGAGTCCGTTTCAGCGAACTTATGCTGCTCAGATTAAGAAGTGTGGAGAGATGGCACGCAAATTGCGTTTTTTCAAGGAGCAGATGTCAAAGTCTGGAGTGGTTTCAAAAGGGCTCATAACAAAAACTGAAATAAATGTGGATGATCTAGAGGTCAAACTCGGAGAACTTGAGGCTGAATTGGTTGAAATAAATGCAAATGGGGAGAAGTTACAGCGTTCATTCGGTGAACTCGTAGAATATAAACTTGTTCTGCAGAAGGCTGGTGAATTTTTCCACTCAGCTCAAAGCAGTGCCTTAGAACAGCACAGAGAATACAAATCACGTCAAGTGGGTGAAGAATCCTTAGACACGCCACTATTGTTGGAGCAAGATATCTCAGCTGATGCATCAAAGCAAATTAAGTTAGGGTTCCTTGCTGGAATTGTTGCTAGGGAAAAATCTATGACATTCGAGAGGATTCTGTTTCGTGCCACAAGGGGAAACATATTTCTAAAGCAGACAGCTGTTGAGCATCCTGTTACAGATCCTGTATCTGGAGACAAGATTGAGAAAAATGTTTTTGTGATTTTCTACTCTGGAGAAAGAGCAAAGAACAAAATTCTTAAAATTTGTGAGGCATTTGGAGCAAATCGATACCCTTTTACTGAAGACCTGGACAAACAAGCGCAGATGATCGCTGAGGTTTCAGGAAGGCTCTCTGAACTGAGAACTACCATAAATGTGGGAATTCAGGATGCATTGCAACGTGCAGCATTTGATTCCAATTCCCAAGTTGGGGCCATTTTCCAAGTTCTGCAAACAACAGAATCTCCACCTACCTATTTCCGGACAAATAAATTCACTTCTGCATTCCAAGGAATTGTTGACGCATATGGCGTGGCTAAGTATCAAGAAGCCAATCCTGGTGTATATACTGTTGTCACCTTCCCATTTCTTTTTGCTGTCATGTTTGGCGACTGGGGACATGGAATATGTTTGTTACTTGCAACACTGTACTTCATTGTCAGGGAAAGGAAACTTTCTAATCAGAAGCTTGGTGACATCATGGAAATGACATTTGGAGGGCGCTATGTTATTTTGATGATGGCACTTTTCTCAATATATACAGGCCTCATTTATAATGAGTTCTTCTCTGTCCCATTTGAACTTTTTGGTCGCTCAGCTTATGCTTGTCGTGAACTTGATTGCAGAGACGCAACAACAATCGGGTTGATTAAGGTTGGCCCCACCTACCCATTTGGTGTGGACCCTGTATGGCATGGAACTCGAAGTGAGCTGCCATTCCTCAATTCTTTGAAAATGAAAATGTCAATCCTTCTTGGGGTTGCCCAAATGAACCTTGGAATCATAATAAGCTATTTCAATGCAACATTTTTTAGAAACAATCTCAATATCTGGTATCAATTTTTTCCGCAGATGATATTTTTAAACTCTCTTTTTGGATATCTATCTCTCCTCATAATCATAAAATGGTGCACTGGTTCTCAAGCGGATTTGTACCATATTGTGCTTCTTTTACTGGCACTTATTGCTGTACCGTGGATGCTGTTTCCAAAACCTCTTATATTAAAGAAGCAACAAGAGGAGAGACACCGTGGTGAATCTTATGAGCCATTACAAAGCACAGAAGACACACTTCAATTGGAATCAAATCATGATTCTCATGGTCACGAGGAATTTGAGTTCAGTGAAGTTTTTGTGCATCAGCTTATACATTCAATAGAATTTGTACTTGGAGCAGTGTCGAATACAGCTTCCTACCTTCGTCTTTGGGCACTAAGTCTCGCCCACTCAGAACTGTCGAGCGTATTCTATGAGAAGGTTCTTGTTCTAGCTTGGGGGTTCAACAACGTAATCATCCTCGCAGTGGGCATCATCGTCTTTGTATGCGCCACTGTCGGTGTGTTACTGGTTATGGAAACCCTCAGCGCTTTCCTACACGCTTTGCGTCTTCATTGGGTGGAGTTCCAAAACAAATTTTATGAGGGCGATGGCTACACATTCTACCCATTTTCCTTTGCTTTGCTAGGCGATGAAGCCGAATGA 2208 42.53 MGERRGGCCPPMDLFRSEPMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNSEKSPFQRTYAAQIKKCGEMARKLRFFKEQMSKSGVVSKGLITKTEINVDDLEVKLGELEAELVEINANGEKLQRSFGELVEYKLVLQKAGEFFHSAQSSALEQHREYKSRQVGEESLDTPLLLEQDISADASKQIKLGFLAGIVAREKSMTFERILFRATRGNIFLKQTAVEHPVTDPVSGDKIEKNVFVIFYSGERAKNKILKICEAFGANRYPFTEDLDKQAQMIAEVSGRLSELRTTINVGIQDALQRAAFDSNSQVGAIFQVLQTTESPPTYFRTNKFTSAFQGIVDAYGVAKYQEANPGVYTVVTFPFLFAVMFGDWGHGICLLLATLYFIVRERKLSNQKLGDIMEMTFGGRYVILMMALFSIYTGLIYNEFFSVPFELFGRSAYACRELDCRDATTIGLIKVGPTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIISYFNATFFRNNLNIWYQFFPQMIFLNSLFGYLSLLIIIKWCTGSQADLYHIVLLLLALIAVPWMLFPKPLILKKQQEERHRGESYEPLQSTEDTLQLESNHDSHGHEEFEFSEVFVHQLIHSIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLVLAWGFNNVIILAVGIIVFVCATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYTFYPFSFALLGDEAE 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 45234372 45242738 + Bma028166.3 Bma08g00785 87612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00785 735 PANTHER VACUOLAR PROTON ATPASES 6 297 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma08g00785 735 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 6 297 - -
Bma08g00785 735 Pfam V-type ATPase 116kDa subunit family 297 550 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma08g00785 735 Pfam V-type ATPase 116kDa subunit family 38 294 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma08g00785 735 Pfam V-type ATPase 116kDa subunit family 555 727 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma08g00785 735 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 556 734 - -
Bma08g00785 735 Coils Coil 93 127 - -
Bma08g00785 735 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 297 558 - -
Bma08g00785 735 PIRSF ATP6V0A1 10 297 IPR026028 GO:0000220|GO:0046961
Bma08g00785 735 PIRSF ATP6V0A1 549 735 IPR026028 GO:0000220|GO:0046961
Bma08g00785 735 PIRSF ATP6V0A1 294 555 IPR026028 GO:0000220|GO:0046961
Bma08g00785 735 PANTHER VACUOLAR PROTON ATPASES 297 558 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma08g00785 735 PANTHER VACUOLAR PROTON ATPASES 556 734 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00566 Bma08g00785 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00148 Bma-Chr5:4434871 Bma08g00785 Bma-Chr8:45234372 0 dispersed
Bma07g00127 Bma-Chr7:1993259 Bma08g00785 Bma-Chr8:45234372 0 dispersed
Bma03g00566 Bma-Chr3:4689080 Bma08g00785 Bma-Chr8:45234372 1.52E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00785 K02154 - tcc:18607718 1184.09