Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00814 ATGGAGAAATCGGGATCAATGGCGGTCTTGGTTCTGTTCACTACTTGCTTAGTTACCCATCTGGTTTATGTCGCTCAAGCTCAGAATCAGACGGCCACAACTGATCCTGCTGAAGCTAGAGCTCTGAACTCAATCTTTGAACAATGGGGTATTGAAGCCCAATCAGGGGTTTGGAACATAAGTGGGGAACTATGTAGTGGAAGAGCCTCTCCCAGCGACTCAGCCACCATTGATGACAAGGCTTATAATCCATTCATCAAATGTGATTGCTCATATGACAACGGCGCTACCTGCCACATAGTCTCTCTGAAGGTTTATGCCCGCAGTGTTGTTGGTGTACTGCCGGTAGAGCTATGGACATTGACATTCCTCACTAATTTAAACTTGGGCCAGAATTACATTCAAGGCCCCCTTTCTGCGTCAGTGGGGAATCTAACACGAATGCAGTACTTGAACTTAGGCATCAACACATTATCAGGAGAACTTCCGAAAGAACTTGGAAATCTTACTGATCTGAGAATGTTGGCTATTGGAGCTAATAACTTCTCTGGCCCCCTGCCATCTGAGATCGGAAATCTCATTAAAATGGAGCAACTCTATATAGATAGTTCTGGAGTAAGTGGAGAGATTCCTACAACATTTGCCAAGCTAACTAATCTACAGCAAATATGGGCATCAGACACTGAACTCACAGGCAGGATACCTGACTTCATTGGCAATTACTCAAAGCTCTCTGTCCTGAGGCTTCAAGGAAACTCTTTTGAAGGTCCTATACCAACGTCCTTCTCAAATTTGACGTCTTTAACTGATTTGAGAATAAGCGGTTTATCAAATGGGACCTCTTCACTGGCATTCATAAATAATATGAAGTCTTTAACTATCTTAATTCTGAGCAATAACAATATTTCTGGTTCGATTCCATCCAATATTGGAGAATTCGTGTCACTGACTCAGCTGGACTTGAGCTTCAACAATCTTGTGGGACCTATTCCAGATTCGATTTTCAATTTGACCTCACTCTCCTTTTTGTTTCTTGGAAATAATATGTTAAATGGTACCCTGCCTGAAAGAAAGAGTTCAACTCTTCTAAATATAGATGTATCATATAATTATTTGGCAGGGGGCTTTCCATCTTGGGTCAATAATGAAGCCTTACAACTTAATTTAGTGGCCAACAACTTCACAGTAGGGAGTTCAAACAGCAGTGTTTTGCCTTCTGGATTAAACTGTCTTCAGCGGGACTTTCCTTGCCATCGTGGTTTGGGAAACTATTATAATTTTGCAATAAAATGTGGGGGTCCGCCCATTACAAGCTCAGGAGGGATTGAATATGAAAAGGAGAATGAAACCCTTGGCCCAGCTACATACTTTGTTACTGGGACAAACAGGTGGGCTGTGAGTAATGTTGGGTATTTTTCTGGGAGCAACAATCCTTCATACACGAGTTTTTCGTCATCACAATTCAGAAATACTTTAGACCCTGAACTTTTCCAAACATCAAGGCTCTCTGCTTCATCGCTGAGGTACTATGGATTAGGCCTTGAAAATGGTAACTACACTGTCACTCTCCAGTTTACAGAAATAGCTTTCCCAGATTCAACTACATGGCAAAGCCTCGGGAGGCGCGTCTTTGATATTTTTATACAGGGAAATCTGGTGTTGAAGGATTTTGACATTAGAAAGGCAGCAGATGGGGTCTCATTTGTTGCTGTTCAAAGGCAATTCACGGTCCAAGTGTCGGAAAACTTCATGGAAATCCATCTCTTTTGGGCTGGAAAAGGAACTTGCTGCATACCAGATCAAGGCACCTATGGTCCTTCTATTTCAGCCATCAGCGCCACTCCAAATTTCAACCCATCTGTTTCAAACAACCCTCCAACCACCGAGAAAAGTAAAACAGGGTTGATTGCTGGGGTTGTTGTTGGTGTCGGAGTTGTTCTTCTCCTGGCTGCTTTTGTATTTTTCTTTATTGTTTACAGAAGGAAAAAGCTTCGTGAAAAAGAAGAAGAGGAACTCCGAGGAATAGATGCGAGACCATATACTTTCAGTTATGCAGAACTGAAGGGTGCCACGGAGGACTTCAATTTGGCCAATAAGCTCGGAGAGGGAGGATTTGGGCCCGTTTATAAGGGAAAACTAAATGATGGGAGAGTGGTTGCTGTAAAGCAACTCTCTGCTGCATCCCACCAAGGAAAGAGCCAATTTGTGACTGAGATTGCTACAATATCTGCTGTCCAACATCGCAACCTTGTGAAACTCTTCGGATGCTGCATCGAGGGAGACAAACGTCTCCTCGTTTACGAATATCTCGAGAACAAGAGTCTCGATCAAGCACTGTTTGGAAAAACAAACTTAAACCTCGATTGGGCGACCCGATTTGATATTTGTGTGGGCGTAGCAAGGGGTCTTGCTTATCTTCACGAGGAATCGAGGGTGCGCATTGTACACAGAGATGTAAAGGCCAGTAATATTCTGCTTGATGGCGAACTCATCCCCAAACTTTCTGACTTTGGTCTGGCCAAGCTTTATGATGACAAAAAGACCCACATAAGCACACGTGTGGCTGGCACAATTGGATATCTTGCACCAGAGTATGCCATGCGTGGCCACCTCACCGAAAAGGCTGATGTTTTTGCCTTTGGTGTTGTGGCTCTGGAGCTTGTTAGTGGAAGGCCAAATTCCGACACAAGCTTGGAACCGGACAAAGTTTATCTTCTCGAATGGGCCTGGCATCTGCACGAAAACAACTGTGAAATCGAGATGGTGGATTCAAGCCTTTCGGAGTTTGACGAGGAAGAAGTAATACGAGTGATAGGAATAGCACTTCTTTGCACCCAAACGTCACCAAATCTCCGGCCGTCAATGTCTCGGGCGTTGGGAATGCTAAGTGGAGATATCGAAGTGACCCCCGTGACGTCGAGGCCCGGATATTTGACCGACTGGAATTTCGATGATATAAGCAGCACCTCAATGAAAACAGCTGATAGAAGCCATTTCACCGGGACAACGGACTCGAGCATGGTTGCCGATCCAGAGAATTCTCCCATTGACTGCTCTAAGCCGATGCTTCGTGGCCTGATCGGAGACGGAAGATGA 3096 44.32 MEKSGSMAVLVLFTTCLVTHLVYVAQAQNQTATTDPAEARALNSIFEQWGIEAQSGVWNISGELCSGRASPSDSATIDDKAYNPFIKCDCSYDNGATCHIVSLKVYARSVVGVLPVELWTLTFLTNLNLGQNYIQGPLSASVGNLTRMQYLNLGINTLSGELPKELGNLTDLRMLAIGANNFSGPLPSEIGNLIKMEQLYIDSSGVSGEIPTTFAKLTNLQQIWASDTELTGRIPDFIGNYSKLSVLRLQGNSFEGPIPTSFSNLTSLTDLRISGLSNGTSSLAFINNMKSLTILILSNNNISGSIPSNIGEFVSLTQLDLSFNNLVGPIPDSIFNLTSLSFLFLGNNMLNGTLPERKSSTLLNIDVSYNYLAGGFPSWVNNEALQLNLVANNFTVGSSNSSVLPSGLNCLQRDFPCHRGLGNYYNFAIKCGGPPITSSGGIEYEKENETLGPATYFVTGTNRWAVSNVGYFSGSNNPSYTSFSSSQFRNTLDPELFQTSRLSASSLRYYGLGLENGNYTVTLQFTEIAFPDSTTWQSLGRRVFDIFIQGNLVLKDFDIRKAADGVSFVAVQRQFTVQVSENFMEIHLFWAGKGTCCIPDQGTYGPSISAISATPNFNPSVSNNPPTTEKSKTGLIAGVVVGVGVVLLLAAFVFFFIVYRRKKLREKEEEELRGIDARPYTFSYAELKGATEDFNLANKLGEGGFGPVYKGKLNDGRVVAVKQLSAASHQGKSQFVTEIATISAVQHRNLVKLFGCCIEGDKRLLVYEYLENKSLDQALFGKTNLNLDWATRFDICVGVARGLAYLHEESRVRIVHRDVKASNILLDGELIPKLSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFAFGVVALELVSGRPNSDTSLEPDKVYLLEWAWHLHENNCEIEMVDSSLSEFDEEEVIRVIGIALLCTQTSPNLRPSMSRALGMLSGDIEVTPVTSRPGYLTDWNFDDISSTSMKTADRSHFTGTTDSSMVADPENSPIDCSKPMLRGLIGDGR 1031
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 45755198 45763846 - Bma028204.1 Bma08g00814 87641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00814 1031 SUPERFAMILY L domain-like 97 380 - -
Bma08g00814 1031 CDD STKc_IRAK 700 962 - -
Bma08g00814 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Bma08g00814 1031 Gene3D - 423 615 - -
Bma08g00814 1031 Pfam Malectin domain 426 611 IPR021720 -
Bma08g00814 1031 Gene3D Transferase(Phosphotransferase) domain 1 770 970 - -
Bma08g00814 1031 Gene3D Ribonuclease Inhibitor 73 200 IPR032675 -
Bma08g00814 1031 SUPERFAMILY Protein kinase-like (PK-like) 677 984 IPR011009 -
Bma08g00814 1031 Pfam Protein tyrosine and serine/threonine kinase 695 956 IPR001245 GO:0004672|GO:0006468
Bma08g00814 1031 ProSiteProfiles Protein kinase domain profile. 694 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00814 1031 SMART serkin_6 694 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00814 1031 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 105 1001 - -
Bma08g00814 1031 Gene3D Ribonuclease Inhibitor 201 413 IPR032675 -
Bma08g00814 1031 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 105 1001 - -
Bma08g00814 1031 Gene3D Phosphorylase Kinase; domain 1 657 769 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00814 Bma-Chr8:45755198 Bma14g00974 Bma-Chr14:11374834 0 dispersed
Bma10g00476 Bma-Chr10:5478334 Bma08g00814 Bma-Chr8:45755198 2.47E-112 dispersed
Bma08g00814 Bma-Chr8:45755198 Bma13g00923 Bma-Chr13:39663759 5.33E-179 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66673 PF07714 PK_Tyr_Ser-Thr 2.10E-45 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00814 - - jre:108998011 1447.57