Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00818 ATGGGAGTAATTGCAGGTGCGGGTCATTATGCAGCTAATCCTCACTCAAATGCTGCCATGGTGGCTTCTGCAACTCCTCCAAATCAATCTCCAGCCTCTTTTTCAAATTCACCTCACCAGCTTGCATACCAGCAAGCCCAACATTTCTATCACCAACAGCAGCAGCAACAACAACAGCAGCTGCAAATGTTCTGGGCTAACCAAATGCAAGAAATTGAGCAGAATACAGACTTCAAAAATCACAGCCTTCCTCTTGCTAGGATAAAGAAAATAATGAAAGCCGATGAGGATGTCAGAATGATATCGGCAGAAGCCCCAGTGATATTTGCAAAAGCGTGTGAAATGTTCATCCTCGAGCTGACCTTGCGCTCTTGGATCCATACAGAAGAGAACAAGAGAAGAACTCTGCAGAAAAACGATATTGCAGCTGCCATTTCAAGGACAGACGTCTTCGATTTTTTGGTTGACATCATTCCCAGGGATGAGTTGAAAGAGGAGGGATTGGGAGTGACCAAGGCCTCTCTTCCGGTCGTTGGCTCGCCGGCTGATATTCCTTATTACTATGTCCCGCCACATCCAGTTGGGCCCACAATGTATGCGGCTCAACAGCCTCGGCCACCTATTGCTTTTATGCCATGGCCCCACAGCCAGCCGCAGCCGGACCAGAACAATGCGTAG 678 48.08 MGVIAGAGHYAANPHSNAAMVASATPPNQSPASFSNSPHQLAYQQAQHFYHQQQQQQQQQLQMFWANQMQEIEQNTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKASLPVVGSPADIPYYYVPPHPVGPTMYAAQQPRPPIAFMPWPHSQPQPDQNNA 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 45893581 45894258 + Bma028212.1 Bma08g00818 87645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00818 225 Pfam Core histone H2A/H2B/H3/H4 33 145 IPR007125 GO:0003677
Bma08g00818 225 SUPERFAMILY Histone-fold 41 154 IPR009072 GO:0046982
Bma08g00818 225 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 18 193 - -
Bma08g00818 225 Gene3D Histone, subunit A 43 160 IPR009072 GO:0046982
Bma08g00818 225 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 18 193 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01251 Bma-Chr3:20829954 Bma08g00818 Bma-Chr8:45893581 2.16E-62 dispersed
Bma06g00262 Bma-Chr6:3628284 Bma08g00818 Bma-Chr8:45893581 1.29E-61 dispersed
Bma05g00812 Bma-Chr5:45432641 Bma08g00818 Bma-Chr8:45893581 1.13E-30 transposed
Bma11g00317 Bma-Chr11:2976158 Bma08g00818 Bma-Chr8:45893581 1.76E-11 transposed
Bma14g01344 Bma-Chr14:24851229 Bma08g00818 Bma-Chr8:45893581 2.12E-67 transposed
Bma03g00499 Bma-Chr3:3919350 Bma08g00818 Bma-Chr8:45893581 9.13E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57768 PF00125 Histone 2.50E-18 CL0012 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00818 K08066 - tcc:18594891 322.013