Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00819 GATGGATCTGAAGGACACCGAACCGTTATCCGTCCACTGTCTAGAGCGGGAGGTGATCGCTGCTCTGTGAAACCAGCCTCACGCATTGCCCTCCGCTCTACGAACCACGCAGCCTTCAGCGTTAGCCGAGGCTCCGGGGGTCAACTCCAGACTTGGAGCGGGCGGCACAGATTCTGTCCGTGTCAGATCCGATACAGCGGACGCCCAAAAGGCGTGACTCCCAAATATAGTTTGAAGCCTTTGGTGGCAAGATTGTCCGAACTCCTTGGTCTTGAGGTGAAAATGGCTAATGATTGTATTGGTGAGGAAGTTGAGAAATTGGTTGCTGAATTACCTGATGGAGGTGTATTGCTTCTCGAGAATGTGCGATTCTACAAGGAGGAAGAGAAGAATGACCCCGAGTTTTCAAAGAAGTTAGCTTCTCTTGGAGATGTATATGTGAATGATGCCTTCGGCACTGCTCATAGAGCTCATGCTTCAACCGAGGGAGTGGCTAAATACCTAAAACCTTCTGTTGCAGGATTTCTTATGCAGAAGGAACTTGACTATCTTGTTGGAGCGGTATCGAATCCCAAGAGGCCTTTTGCTGCCATAGTTGGTGGGTCAAAGGTATCTTCAAAGATTGGTGTGATCGAGTCCTTATTGGAGAAGGTCGATGTTCTATTGTTGGGTGGAGGAATGATATTTACATTTTACAAAGCGCAAGGGTACTCTGTTGGGTCATCCCTTGTTGAGGAAGATAAGCTCGATCTTGCTACCTCCCTTATGGAGAAGGCCAAAAAGAAGGGGGTCTCTTTGCTACTTCCAACTGACGTGATTATCGCCGATAAATTTGCTCCTGATGCTAATAGCATGACTGTACCAGCATCAGGCATCCCAGATGGTTGGATGGGGTTGGATATTGGACCCGATTCCATAAAGACGTTCAGCGAAGCTTTGGATTCAACAAAAACAATAATTTGGAATGGACCAATGGGCGTGTTTGAGTTTGATAAGTTTGCTGCTGGAACAGAGGCAATTGCCAGAAAATTGGCAGAGCTGAGTGGGAAGAACGTGACTACCATTATCGGAGGAGGAGACTCTGTTGCAGCTGTGGAGAAGGTCGGGCTTGCTGACAAGATGAGCCACATCTCCACGGGAGGTGGTGCCAGCTTAGAGCTTCTCGAAGGGAAACCACTTCCGGGTGTCCTTGCGCTCGACGACGCTTGA 1209 48.72 DGSEGHRTVIRPLSRAGGDRCSVKPASRIALRSTNHAAFSVSRGSGGQLQTWSGRHRFCPCQIRYSGRPKGVTPKYSLKPLVARLSELLGLEVKMANDCIGEEVEKLVAELPDGGVLLLENVRFYKEEEKNDPEFSKKLASLGDVYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGYSVGSSLVEEDKLDLATSLMEKAKKKGVSLLLPTDVIIADKFAPDANSMTVPASGIPDGWMGLDIGPDSIKTFSEALDSTKTIIWNGPMGVFEFDKFAAGTEAIARKLAELSGKNVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKPLPGVLALDDA 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 45895131 45905417 + Bma028213.1 Bma08g00819 87646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00819 402 Gene3D - 188 401 IPR015824 GO:0004618|GO:0006096
Bma08g00819 402 AntiFam Antisense to SRP RNA 5 58 - -
Bma08g00819 402 PANTHER PHOSPHOGLYCERATE KINASE, CYTOSOLIC 66 402 - -
Bma08g00819 402 SUPERFAMILY Phosphoglycerate kinase 66 401 IPR036043 GO:0004618|GO:0006096
Bma08g00819 402 Gene3D - 63 185 IPR015824 GO:0004618|GO:0006096
Bma08g00819 402 CDD Phosphoglycerate_kinase 67 401 IPR001576 GO:0004618|GO:0006096
Bma08g00819 402 PIRSF Pgk 62 402 IPR001576 GO:0004618|GO:0006096
Bma08g00819 402 Hamap Phosphoglycerate kinase [pgk]. 12 401 IPR001576 GO:0004618|GO:0006096
Bma08g00819 402 PRINTS Phosphoglycerate kinase family signature 377 394 IPR001576 GO:0004618|GO:0006096
Bma08g00819 402 PRINTS Phosphoglycerate kinase family signature 114 129 IPR001576 GO:0004618|GO:0006096
Bma08g00819 402 PRINTS Phosphoglycerate kinase family signature 142 164 IPR001576 GO:0004618|GO:0006096
Bma08g00819 402 PRINTS Phosphoglycerate kinase family signature 354 365 IPR001576 GO:0004618|GO:0006096
Bma08g00819 402 PRINTS Phosphoglycerate kinase family signature 173 195 IPR001576 GO:0004618|GO:0006096
Bma08g00819 402 PRINTS Phosphoglycerate kinase family signature 196 215 IPR001576 GO:0004618|GO:0006096
Bma08g00819 402 PRINTS Phosphoglycerate kinase family signature 318 343 IPR001576 GO:0004618|GO:0006096
Bma08g00819 402 Pfam Phosphoglycerate kinase 67 391 IPR001576 GO:0004618|GO:0006096
Bma08g00819 402 PANTHER PHOSPHOGLYCERATE KINASE 66 402 IPR001576 GO:0004618|GO:0006096
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma08g00819 Bma12g00579 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00819 Bma-Chr8:45895131 Bma12g00579 Bma-Chr12:25156246 0 dispersed
Bma03g00497 Bma-Chr3:3899461 Bma08g00819 Bma-Chr8:45895131 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00819 K00927 - twl:119989508 610.912