Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00820 ATGCGCACACTTGCATTTCATCCTCGTCCTCAAATTCTCAAAAAAAATTCTCACTTTCAATCCACCCACCACCACTTTTCCTTCCCTGAAGACCGCAGAATTACAAGATTGTGCAATTCAGAGTGCCACCGACGACCCCGATCGGTTTCGCAACCTCGAGCTGTTCGAGAATGGAAAGAGTACGAGGAAGCTGTGAAGCGCAAGGACCTCGCTGGAGCTCTCAGGCTACTAAAATCCATTGAAGGAGAAACCCAAATGGATCCCGTTAATGGCTCTGCTTCTCGCGAGCCTTTTCGGTCCGGAATTGGCGAGTCAGGGTTCATTGATTGGGAAAGGGATTGGGACGTTTTAGATGCTTGTTTGAATGCGGATGACATGAAGCTTGTTGCAAATACTTATGGCTTCCTCAAGGATAGAGGGTTCTTGCCCAATTTCGGCAAATGCAGGAACATTGTCTTGGAAGGATCAAGAGATGTTACCCCATCTGTATTGAAATCTTCTACTGGTTTAGAAGTGTCCAAGTTGTCTCCAAAGAAATGGGGTCTTTCAGGAAGCTCTCAATTAGCATTGCTTGCTTTTCTTGGAGGTACATCGTTTCTTATTTCTCAGGGTATAGATATCAGGCCTAATCTTACAGTAGTATTGGGGCTAGCATTTTTGGACTCTATCTTTCTCGGTGGTACGTGTTTAGCTCAAATATCAAGTTATTGGCCTCCAAATAGACGTCGAATCTTGGTCCACGAAGCTGGCCATCTCTTGATCGCTTATCTGATGGGTTGCCCTATCCGCGGGGTGATTTTGGATCCAATTGTTGCAATGCAAATGGGCATTCAAGGGCAGGCTGGAACTCAATTTTGGGACGAAAAAATGGCTAATGACCTTGCTGAAGGACGTCTGGACGGCTCTTCATTTGACAGATATTGCATGGTGCTTTTTGCAGGAATTGCAGCCGAAGCTCTTGTCTACGGTGATGCCGAGGGGGGAGAAAATGATGAAAATTTCTTCAAAAGTATTTGTGTTCTTTTGCAGCCTCCATTGTCTGTTGCCCAGATGTCAAATCAAGCAAGATGGTCAGTTCTTCAGTCTTTCAATCTGCTCAAGTGGTATAAACGGCCTCATCAAGCAGTTGTTAAAGCTCTGGAAAGTGGGTGCAGTCTTAGTTCCGTGATTCGGAGAATGGAAGAAGCTATCTTAACGAATAGATGA 1206 45.11 MRTLAFHPRPQILKKNSHFQSTHHHFSFPEDRRITRLCNSECHRRPRSVSQPRAVREWKEYEEAVKRKDLAGALRLLKSIEGETQMDPVNGSASREPFRSGIGESGFIDWERDWDVLDACLNADDMKLVANTYGFLKDRGFLPNFGKCRNIVLEGSRDVTPSVLKSSTGLEVSKLSPKKWGLSGSSQLALLAFLGGTSFLISQGIDIRPNLTVVLGLAFLDSIFLGGTCLAQISSYWPPNRRRILVHEAGHLLIAYLMGCPIRGVILDPIVAMQMGIQGQAGTQFWDEKMANDLAEGRLDGSSFDRYCMVLFAGIAAEALVYGDAEGGENDENFFKSICVLLQPPLSVAQMSNQARWSVLQSFNLLKWYKRPHQAVVKALESGCSLSSVIRRMEEAILTNR 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 45896902 45899245 - Bma031461 Bma08g00820 87647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00820 401 PANTHER - 42 399 - -
Bma08g00820 401 Gene3D Peptidase M41 234 340 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Bma08g00820 401 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE 42 399 - -
Bma08g00820 401 SUPERFAMILY FtsH protease domain-like 237 381 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01061 Bma-Chr3:12952696 Bma08g00820 Bma-Chr8:45896902 7.92E-20 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00820 - - jre:109011252 569.311