Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00821 ATGACTATTACTGGTGCGAGTGAAAAACATGCCCTTCATGCTTTGAAAGCTAGTGATTGGCATCTTGAAGGAGCCTTTGATGTATTTTACAGTCAACCTCAGATTAAAACATTTACCGATTCAAGACATTTGGAAGAGCTTTACAATAGATATAAAGGCAAGCTCCCCTTTTTAGCTCACATGATTGATTCCCTTGAAAAATTCCGAGAAAGGATACCATTCATGCGCACAGAGCTCAAAGCTGAACATAAGTTCCGTGAAATCTACCTTTTTGCATTTGGCTGGGCAAAAGAAAAGGGTCAAAAATCTTTGGCGTTGGACACGGCAATAGGAATGTGGCAATTGCTGTTTGCCGATAGAGAGTGGCCTTTGGTTGATCACTGGTGTCAATTCCTACAGGCTCGACACAATAAAGCTATCTCAAGGGACACTTGGTCTCAGCTACTGGAGTTTGCTAGGATGGTAGACGCTACGCTATCAAATTACGATGCTGCCGGGGCTTGGCCTTATCTAATTGACGAATTTGTTGAATACTTGAATGAGAATGGCATTATCCAAAGTGGTCAGTTGAATGAACAAAAACGATGA 588 41.67 MTITGASEKHALHALKASDWHLEGAFDVFYSQPQIKTFTDSRHLEELYNRYKGKLPFLAHMIDSLEKFRERIPFMRTELKAEHKFREIYLFAFGWAKEKGQKSLALDTAIGMWQLLFADREWPLVDHWCQFLQARHNKAISRDTWSQLLEFARMVDATLSNYDAAGAWPYLIDEFVEYLNENGIIQSGQLNEQKR 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 45907827 45911260 - Bma028214.1 Bma08g00821 87648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00821 195 Pfam Cullin binding 68 178 IPR005176 -
Bma08g00821 195 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 4 52 - -
Bma08g00821 195 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 62 187 - -
Bma08g00821 195 Pfam UBA-like domain 1 32 - -
Bma08g00821 195 Gene3D Cullin, PONY binding domain 81 188 IPR042460 -
Bma08g00821 195 PANTHER RP42 RELATED 4 52 IPR014764 -
Bma08g00821 195 PANTHER RP42 RELATED 62 187 IPR014764 -
Bma08g00821 195 ProSiteProfiles DCUN1 domain profile. 1 180 IPR005176 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00495 Bma08g00821 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00821 Bma-Chr8:45907827 Bma10g00821 Bma-Chr10:14375143 5.60E-11 dispersed
Bma03g00495 Bma-Chr3:3884439 Bma08g00821 Bma-Chr8:45907827 1.51E-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00821 K17822 - tcc:18594929 315.849