Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00827 ATGAGTTGTGCGACTCGCCTTCTCAGTCAAACTGACTCGAATGATTCGGAAACTCGCCTTCCATCCCTTGATTCCGCCATTGAAGACTGTATTGGAGAGCTCGGATATGCTCAGTTCTTTCAAGCCGTCCTCGTTTCTTTTGCATGGGTTTTCGATGCGCAACAGACGTTCATCTCCGTCTTCACCGACGCCATTCCGCAGTGGCACTGTGCAGTCACCGGCGACCGATGCAGTTCCTTCTCTGACGTGTGTCAACTTCCCAAGGACTTTTGGGAGTGGGATCGTCCGGCGCATGCTTCTGTTGTAACCGAATGGGGATTGAATTGCAAAGGATCTTTCTTCGTCAGCCTGCCGACGTCGTCTTTCTTCACCGGATGTCTCGTCGGCGGCCTCCTCTTCTCTACTCTCGCCGACTCGGCGCTTGGCCGTAAAAACAGCCTTTTTCTCTCCTGCCTAATAATTTCCATCTCCGCTCTACTCACAGCCTTATCTACCAACATTTGGATCTACTCGGCCTTGCGTTTCCTCTGTGGATTAGGCCGCGCATCAATCGGAACGTCGGCGCTCGTCCTATCAACAGAGCTCGTCGGGAGAAAGTGGCGAGGCCAGGTCGGCGTTATCGGATTCTTCTGCTTCACTCTCGGATTCCTATCCTTACCTGCGTTAGGTTATACAAACAGGGACTTTTCTTGGAGAGCTCTCTATTTATGGACCTCAATTCCAACTCTCTTCTACTCTTTTCTGGTTCACTTTACGGTTTACGAATCGCCAAGATGGCTTCTAGTCCGAGGGCGTAAAGAAGAAGCAGTAGCTGTTCTCCGGCGAATGTCGTCGACTAAAGTGACCTTTTCCGGAATCTCAATGGAGCCAGAAACATGGAATACAAACCCCTATTCCACCATTAAAATCCTTTTCAAGAAAAAATGGGCGTTCCGTCGTTTAGCGGTTGTTATGGTGATAAGCTTCGGAATCGGAATGGTGTACTACGGAATGCCATTGGGTCTCGGAAGCTTATCCTTCAATTTCTACTTGAGCGTCACCTTTAACGCTCTCTCAGAGCTACCGGCATCTCTTATAACCTTCTTCCTCATCGACAAACTGAACCGGAGAAGCTCCATTCTAGGGCTCACTGTTCTTAGCGGAGTTTGCAGTGTGATGTCTGCCATGGATGGACAGGTGTGGGGGAGGTTTCAGATTGGGTTAGAACTGGTGTCTTTCTTCAGCGCTTGTACAGCGTTCAACGTGTTGCTGATATTCGCAATCGAGCTGTTTGCGACGAGCGTGAGGAACTCAGCTTTATCAATGGTTCGGCAGGCACTGGTGTTCGGGGGAGTGTTCGGTCCGATGATTGCAGCGGCGGGGAGGAAAGAAAAGCGTTTGCCCTACGCGGTGTTCGGGGTTGTTATAGGGTTAACTGGGCTTTTTGCGATATGTTTGCCGGAGACGAGGGGTAAGCCGACTTGTGACACCCTGGAAGAAGAGGAAATTAAAAATTTAAGTTAA 1503 49.9 MSCATRLLSQTDSNDSETRLPSLDSAIEDCIGELGYAQFFQAVLVSFAWVFDAQQTFISVFTDAIPQWHCAVTGDRCSSFSDVCQLPKDFWEWDRPAHASVVTEWGLNCKGSFFVSLPTSSFFTGCLVGGLLFSTLADSALGRKNSLFLSCLIISISALLTALSTNIWIYSALRFLCGLGRASIGTSALVLSTELVGRKWRGQVGVIGFFCFTLGFLSLPALGYTNRDFSWRALYLWTSIPTLFYSFLVHFTVYESPRWLLVRGRKEEAVAVLRRMSSTKVTFSGISMEPETWNTNPYSTIKILFKKKWAFRRLAVVMVISFGIGMVYYGMPLGLGSLSFNFYLSVTFNALSELPASLITFFLIDKLNRRSSILGLTVLSGVCSVMSAMDGQVWGRFQIGLELVSFFSACTAFNVLLIFAIELFATSVRNSALSMVRQALVFGGVFGPMIAAAGRKEKRLPYAVFGVVIGLTGLFAICLPETRGKPTCDTLEEEEIKNLS 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 46094264 46095766 + Bma028223.1 Bma08g00827 87654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00827 500 Pfam Sugar (and other) transporter 115 486 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bma08g00827 500 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 484 IPR020846 GO:0022857
Bma08g00827 500 Gene3D MFS general substrate transporter like domains 34 495 IPR036259 -
Bma08g00827 500 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 3 17 498 - -
Bma08g00827 500 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 17 498 - -
Bma08g00827 500 SUPERFAMILY MFS general substrate transporter 111 486 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00827 Bma-Chr8:46094264 Bma10g00528 Bma-Chr10:6140184 7.11E-47 dispersed
Bma08g00827 Bma-Chr8:46094264 Bma06g01550 Bma-Chr6:51835853 2.77E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00827 - - fve:101312997 662.914