Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00829 ATGTCATCTACGCTTCCAAATTATGATCATCTGACCGACGAGGTTAAAAGTTGTTCCCTCAGTACTGTCATCAACAATGGTCAAGGGAGCGGAAACAACTCTCGTGCCGACAGTTTAGAGAGCTCCAACACTCCCCTCAGGCCTCACACCGGCGGGGATGTGAGATGGGACTCCATTAACATGATTTCCAAGGGCTCTCAGCTTAATATCAGTCATTTCCGGCTGCTAAAGCGCATTGGCTATGGAGATATTGGGAGTGTGTATCTGGTTGAACTCAGAGGCACCGATGGCTATTTTGCAATGAAGGTGATGGACAAAGCTTCTCTTGCTGGTAGAAACAAACTACTCAGAGCTCAAACAGAAAAGGAAATACTTGGCCTCCTAGACCATCCATTTTTGCCTACACTCTATTCTTACTTCGATACTGATAAGTTCTATTGCTTGGTAATGGAGTTCTGCAGCGGAGGAAACCTTCATTCTCTGAGACAGAAGCAGCCCAGCAAACATTTTACAGAGGAAGCTGCAAGGTTTTATGCGTCGGAAGTGTTGTTAGCGCTGGAGTACCTTCACATGCTAGGTATTGTTTATAGAGATTTGAAGCCGGAAAATGTGCTTGTGAGAGAAGAGGGCCATATAATGCTCTCCGATTTTGATCTCTCTCTTCGTTGCTCCGTCAGTCCGACCCTCGTCAAATCCTCTTCTGTTCAGGTGAGTAGCATAGGCGGCGGCGGCAGCGGCGATGTCGGCAGCATCCTAGATGATGAGTTCGCAGTGCAAGGCTGTATGCAGCCATCTAATTTCCTCCCTCGGATATTACCGTCGAAGAAAAATAGGAAGTCAAAGTCCGATTTCGGACTCTTCGTCCGCGGATCGCTTCCGGAATTAATGGCGGAGCCGACAAACGTTCGGTCAATGTCCTTCGTCGGAACGCACGAATACTTAGCGCCGGAGATCGTACGCGGTGAGGGCCACTCTGACTCGCTCGCATCGGATATCGCTAGCAAGTACTCCGCCATCACCGATCGGAGTACTTCTTTGTATTTCAACCACAACGACGCCCTAAGGTTTTCTGTCTCCGAGATTTCTTGCAGAACTCCGCATTATCTCTCCCAATCTTCATTCCGTGGTGCTGACGTTGAGGCTTCAGTCGATCCTGTGTCCGGAACTAAACGTTCTTCTGACGTGCTGTATGGGAGTATTTTGGGTTCCCATAACACAATTGGGCGAAGCGAAGCTTGGTATACTACAAACTCTTTAGCCAAGCGCACTAGATTTGAAAGCACAAGCAATTTTCCTTTATATCTACAGAAGCCGGGGGAGAAGGATTTGATCACAAGTTCCTATGGATTTGGAGATAGCTGCAAGGTTGATCATCCTAGTTGGGTTCCGGAAGGTGGAATTCCAGATTGTAAAGAGGTGAAGTTTTACTATCATCTTCTTTCCTGA 1446 47.51 MSSTLPNYDHLTDEVKSCSLSTVINNGQGSGNNSRADSLESSNTPLRPHTGGDVRWDSINMISKGSQLNISHFRLLKRIGYGDIGSVYLVELRGTDGYFAMKVMDKASLAGRNKLLRAQTEKEILGLLDHPFLPTLYSYFDTDKFYCLVMEFCSGGNLHSLRQKQPSKHFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENVLVREEGHIMLSDFDLSLRCSVSPTLVKSSSVQVSSIGGGGSGDVGSILDDEFAVQGCMQPSNFLPRILPSKKNRKSKSDFGLFVRGSLPELMAEPTNVRSMSFVGTHEYLAPEIVRGEGHSDSLASDIASKYSAITDRSTSLYFNHNDALRFSVSEISCRTPHYLSQSSFRGADVEASVDPVSGTKRSSDVLYGSILGSHNTIGRSEAWYTTNSLAKRTRFESTSNFPLYLQKPGEKDLITSSYGFGDSCKVDHPSWVPEGGIPDCKEVKFYYHLLS 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 46131513 46136871 + Bma028225.2 Bma08g00829 87656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00829 481 ProSiteProfiles Protein kinase domain profile. 73 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00829 481 Gene3D Transferase(Phosphotransferase) domain 1 161 334 - -
Bma08g00829 481 PANTHER FLIPPASE KINASE 1-RELATED 22 325 - -
Bma08g00829 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Bma08g00829 481 SMART serkin_6 73 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00829 481 MobiDBLite consensus disorder prediction 23 48 - -
Bma08g00829 481 Gene3D Phosphorylase Kinase; domain 1 67 160 - -
Bma08g00829 481 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 22 325 - -
Bma08g00829 481 Pfam Protein kinase domain 74 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00829 481 SUPERFAMILY Protein kinase-like (PK-like) 63 332 IPR011009 -
Bma08g00829 481 MobiDBLite consensus disorder prediction 23 51 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00483 Bma08g00829 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00829 Bma-Chr8:46131513 Bma06g01369 Bma-Chr6:50522493 8.36E-130 dispersed
Bma03g00484 Bma-Chr3:3773050 Bma08g00829 Bma-Chr8:46131513 4.59E-113 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66674 PF00069 Pkinase 1.60E-36 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00829 - - zju:107424533 517.309