Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma08g00844 | ATGTCCAATTCTGAAGGGGGTAACAACGGCGTCGTCAACGGCGCTGTAATCGACTCTCAGAGACAGCACCCACCGAACAATGGAGCGATTGTCGTCAAAAAGCCGCCCTCCAAAGACCGCCACAGTAAAGTCGACGGTCGCGGTCGTCGTATCCGGATGCCGATCATATGCGCTGCGCGGGTGTTTCAGCTGACCAGGGAGCTTGGCCACAAGTCTGACGGTCAGACCATTGAGTGGCTTCTCCGGCAAGCCGAGCCTTCAATTATAGCTGCTACTGGAACCGGTACTACTCCTGCGAACTTTTCTTCCGTCTCCGTTTCCGTCAGAGGTAGCGCCGGCTCGAACTCCCTCTCTTCGTCTTCGACTTCTTCCTCTCTCTCCCTCTCTCGGCCGCAGGCCTTCTCCGGACCCACCCCTTTTATCCTGGGCAAGCGCGTAAGAACCGACGACGACGGAGGCGCTGCAGCTAAAGAGGAAGGCATATCCGTGGGTCCCACGGTGGGCTCCATAGTGGGTCCCGCCGCCGCCGGTGGCTACTGGGCCATTCCTGCTAGACCGGACTTTGGGCAGATATGGAGCTTCGCGGCAGCGACGGGAACGCCGGAATTGGTTCAGCCGTCGTCGGTGGCTCAACAAGCTTCTTTGTTTCTTCAGCAGCAGCAGCAGTCGATTGGGGAGGCTTCGGCGGCTAGGGTAGGGAATTACCTTCCGGGACATTTGAATTTACTTGCTTCATTATCAGGTGGACACGGCAATTCAGGTCGGAGAGAAGACGACCAACGTTGA | 786 | 57.63 | MSNSEGGNNGVVNGAVIDSQRQHPPNNGAIVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSVSVRGSAGSNSLSSSSTSSSLSLSRPQAFSGPTPFILGKRVRTDDDGGAAAKEEGISVGPTVGSIVGPAAAGGYWAIPARPDFGQIWSFAAATGTPELVQPSSVAQQASLFLQQQQQSIGEASAARVGNYLPGHLNLLASLSGGHGNSGRREDDQR | 261 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 46386758 | 46387543 | - | Bma028241.1 | Bma08g00844 | 87671 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma08g00844 | 261 | MobiDBLite | consensus disorder prediction | 112 | 134 | - | - | |
Bma08g00844 | 261 | PANTHER | TRANSCRIPTION FACTOR TCP FAMILY-RELATED | 1 | 258 | - | - | |
Bma08g00844 | 261 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Bma08g00844 | 261 | MobiDBLite | consensus disorder prediction | 112 | 160 | - | - | |
Bma08g00844 | 261 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Bma08g00844 | 261 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 1 | 258 | IPR005333 | GO:0003700 | |
Bma08g00844 | 261 | Pfam | TCP family transcription factor | 37 | 122 | IPR017887 | - | |
Bma08g00844 | 261 | ProSiteProfiles | TCP domain profile. | 37 | 91 | IPR017887 | - | |
Bma08g00844 | 261 | MobiDBLite | consensus disorder prediction | 34 | 48 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma08g00844 | Bma-Chr8:46386758 | Bma06g00680 | Bma-Chr6:36519399 | 1.00E-39 | dispersed | |
Bma03g00454 | Bma-Chr3:3454189 | Bma08g00844 | Bma-Chr8:46386758 | 4.72E-141 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
57772 | PF03634 | TCP | 2.10E-33 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma08g00844 | K16221 | - | csv:101206050 | 342.428 |