Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00844 ATGTCCAATTCTGAAGGGGGTAACAACGGCGTCGTCAACGGCGCTGTAATCGACTCTCAGAGACAGCACCCACCGAACAATGGAGCGATTGTCGTCAAAAAGCCGCCCTCCAAAGACCGCCACAGTAAAGTCGACGGTCGCGGTCGTCGTATCCGGATGCCGATCATATGCGCTGCGCGGGTGTTTCAGCTGACCAGGGAGCTTGGCCACAAGTCTGACGGTCAGACCATTGAGTGGCTTCTCCGGCAAGCCGAGCCTTCAATTATAGCTGCTACTGGAACCGGTACTACTCCTGCGAACTTTTCTTCCGTCTCCGTTTCCGTCAGAGGTAGCGCCGGCTCGAACTCCCTCTCTTCGTCTTCGACTTCTTCCTCTCTCTCCCTCTCTCGGCCGCAGGCCTTCTCCGGACCCACCCCTTTTATCCTGGGCAAGCGCGTAAGAACCGACGACGACGGAGGCGCTGCAGCTAAAGAGGAAGGCATATCCGTGGGTCCCACGGTGGGCTCCATAGTGGGTCCCGCCGCCGCCGGTGGCTACTGGGCCATTCCTGCTAGACCGGACTTTGGGCAGATATGGAGCTTCGCGGCAGCGACGGGAACGCCGGAATTGGTTCAGCCGTCGTCGGTGGCTCAACAAGCTTCTTTGTTTCTTCAGCAGCAGCAGCAGTCGATTGGGGAGGCTTCGGCGGCTAGGGTAGGGAATTACCTTCCGGGACATTTGAATTTACTTGCTTCATTATCAGGTGGACACGGCAATTCAGGTCGGAGAGAAGACGACCAACGTTGA 786 57.63 MSNSEGGNNGVVNGAVIDSQRQHPPNNGAIVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSVSVRGSAGSNSLSSSSTSSSLSLSRPQAFSGPTPFILGKRVRTDDDGGAAAKEEGISVGPTVGSIVGPAAAGGYWAIPARPDFGQIWSFAAATGTPELVQPSSVAQQASLFLQQQQQSIGEASAARVGNYLPGHLNLLASLSGGHGNSGRREDDQR 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 46386758 46387543 - Bma028241.1 Bma08g00844 87671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00844 261 MobiDBLite consensus disorder prediction 112 134 - -
Bma08g00844 261 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 258 - -
Bma08g00844 261 MobiDBLite consensus disorder prediction 1 26 - -
Bma08g00844 261 MobiDBLite consensus disorder prediction 112 160 - -
Bma08g00844 261 MobiDBLite consensus disorder prediction 1 48 - -
Bma08g00844 261 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 258 IPR005333 GO:0003700
Bma08g00844 261 Pfam TCP family transcription factor 37 122 IPR017887 -
Bma08g00844 261 ProSiteProfiles TCP domain profile. 37 91 IPR017887 -
Bma08g00844 261 MobiDBLite consensus disorder prediction 34 48 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00844 Bma-Chr8:46386758 Bma06g00680 Bma-Chr6:36519399 1.00E-39 dispersed
Bma03g00454 Bma-Chr3:3454189 Bma08g00844 Bma-Chr8:46386758 4.72E-141 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57772 PF03634 TCP 2.10E-33 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00844 K16221 - csv:101206050 342.428