Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00906 ATGAGGGTGTCTGCGGAAATGGGCAGTGATTTTCTCAGGGAAAGAGCGGCAATGATGAGAGAGTCACTGCTGAAGAGCCAGACTATTACGGAAAACGTTGTCTCTATTCTTGGCTCTTTTGATCATCGTCTCTCTGCCCTAGAGACTGCCATGCGACCCACTCAGATCAGAACTCACTCTATTCGCAAAGCTCATGAGAATATTGATAAAACGCTGAAAGCTGCAGAAGGTATATTGGGAAAGTTTGATCTTTCACGTCAGGCCGAAGTGAAAATACTTAAAGGGCCGCATGAAGATTTGGAGAGTTACCTAGAAGCAATTGATCAACTTAGAGGCAATATTCAGTTCTTTAATGGGAAAAAAGGCTTTAAAAGTAGTGATGGGGTGCTTAACAATGCAAATAATCTGCTTGCTAAAGCTATTTCAAAGCTGGAGGAAGAGTTTAAACAACTACTATTATCATATAGCAAACCTGTGGAGCCTGAGCGCCTTTTTGAGTGTCTTCCCAATTCATTGCGACCATCCACGGGATCATCTGGACATCCGGGAGATTCAAATGACAGAAATAATCATTCTGATCATCATAACAGTAACTTAGAAAATGCTGTTTACACACCTCCCACTCTCATACCACCCCGAGTTCTTCCATTGCTACACGACTTAGCTGAGCAGATGATTCAAGCTTCCCACAGACAACAATTACAGAAAATTTACAGGGATGCTCGGGCTCCTGTATTAGAAGAAAGTCTCAGAAAATTAGGAGTTGAGAGACTTGGCAAAGATGATGTTCAAAAGATGCAGTGGGAGGTTTTAGAAGCAAAAATTGGGAATTGGATTCATTTCATGCGCATTGCTGTCAAACTTCTGTTTGCTGGAGAACGTAAAGTTTGTGATCAAATATTTGAAGGCTTTAATTCTCTTAGTGATCAATGCTTTGCGGAGGTAACTACAAGCAGTGTTTCTACACTCTTTAGTTTTGGGGAGGCAATTGCCAGAAGCAAGAGGTCTCCGGAAAAGTTATTTGTACTTTTGGACATGTATGAGATAATGCGAGAGCTTCACACAGAGATCGAGACAATTTTTGTGGGTAAAGCTTGCACGGAAATTAGAGAATCTGCAATGGGTCTGACTAAACAGCTGGCCCAGACAGCTCAAGAGACGTTTGGTGATTTTGAGGACGCCGTTGAAAAGGATGCAACTAAGACGGCTGTGCTGGATGGGACAGTCCATCCTTTGACAAGCTATGTGATTAACTATGTGAAATTTCTGTTTGACTATCAATCAACATTGAAGCAGCTTTTCCAAGAATTTGAACAAGGAGAGCAGACAACGTCACAGTTAGCTAATGTAACAATGAAGATTATGCAAGCTCTTCAATCTAATTTGGATGGAAAATCTAAGCAATACAAAGATGTTGCATTGATTCATTTATTTCTCATGAACAACATCCACTATATTGTCAGATCTGTGCGCAGATCAGAGGCCAAGGATTTGTTAGGGGATGACTGGGTTCAGAGACACAGGAGGATTGTACAGCAGCATGCAAATCAGTATAAAAGGAATGCCTGGGGAAAGGTTTTGCAGTGCTTGTCAGTTCAAGGACTGACCTCATCTGGGGGCGGTAGCACAGCCAGTGGAGATGGAGGAAATAGTAGTGGAGTTTCGAGGGCACTAGTTAAAGACAGGTTTAAAACTTTCAATATGCAATTCGAGGAGCTTCATCAAAAGCAATCGCAGTGGACAGTTCCGGATTCCGAATTGAGAGAGTCCCTAAGACTTGCTGTTGCTGAAGTCTTATTGCCTGCCTATCGGTCGTTCCTTAAACGTTTCGGACCACTTGTTGATACCGGAAAGAGTCCGCAGAAGTACATCCGGTACCAGCCGGAGGATCTTGAGAAGATGCTGGGTGAATTTTTTGAAGGGAAGGCGTCGACCGATCCAAAGCCGCGATAA 1953 42.81 MRVSAEMGSDFLRERAAMMRESLLKSQTITENVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEGILGKFDLSRQAEVKILKGPHEDLESYLEAIDQLRGNIQFFNGKKGFKSSDGVLNNANNLLAKAISKLEEEFKQLLLSYSKPVEPERLFECLPNSLRPSTGSSGHPGDSNDRNNHSDHHNSNLENAVYTPPTLIPPRVLPLLHDLAEQMIQASHRQQLQKIYRDARAPVLEESLRKLGVERLGKDDVQKMQWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFNSLSDQCFAEVTTSSVSTLFSFGEAIARSKRSPEKLFVLLDMYEIMRELHTEIETIFVGKACTEIRESAMGLTKQLAQTAQETFGDFEDAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFEQGEQTTSQLANVTMKIMQALQSNLDGKSKQYKDVALIHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWGKVLQCLSVQGLTSSGGGSTASGDGGNSSGVSRALVKDRFKTFNMQFEELHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPLVDTGKSPQKYIRYQPEDLEKMLGEFFEGKASTDPKPR 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 47947222 47954394 - Bma028322.1 Bma08g00906 87733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00906 650 MobiDBLite consensus disorder prediction 169 205 - -
Bma08g00906 650 MobiDBLite consensus disorder prediction 171 185 - -
Bma08g00906 650 Pfam Exo70 exocyst complex subunit 277 636 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bma08g00906 650 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 645 - -
Bma08g00906 650 SUPERFAMILY Cullin repeat-like 78 640 IPR016159 -
Bma08g00906 650 Coils Coil 130 150 - -
Bma08g00906 650 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 645 IPR004140 GO:0000145|GO:0006887
Bma08g00906 650 Gene3D Exocyst complex component Exo70 77 649 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02005 Bma-Chr1:74410799 Bma08g00906 Bma-Chr8:47947222 0 dispersed
Bma08g00906 Bma-Chr8:47947222 Bma12g01079 Bma-Chr12:43094469 2.77E-116 dispersed
Bma09g01005 Bma-Chr9:49536443 Bma08g00906 Bma-Chr8:47947222 1.43E-49 dispersed
Bma08g00906 Bma-Chr8:47947222 Bma15g00313 Bma-Chr15:3022118 3.87E-114 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00906 K07195 - cit:102629699 1046.57