Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00907 ATGATGAACATCAAAATGGCTGAACATTCCGAAACAGATAGGAACATTGAGCTGTGGAAGATGAAGAAGTTGATCAAGGCACTTGAAACTGCAGAAGGAAATGGAACCAGTATGATTTCTCTGGTCATATCTCCCCGCGATCAAATATCTCGAATTACTAAAATGCTGGCGGATGAACACGGAAAGGCTTCAAACATCAAAAGCCGGGTGAATCGACAATCTGTCTTGGGTGCCATTAAGTCTGCTCAGCAGCGGCTCAAGCTGTACAATAAGGTTCCAAAAAATGGACTGGTGGTCTATGCAGGCAATGTCATAACTGAAGATGGGAAGGAAAAGATGGTCATCTTTGATCTCTCACCTATGAAGCCCATTAACGCATCCCTATATGTCTGTGATAAGAGGTTTCATACAGAAGTATTGACTGAACTTCTACAATCTGATGACAAGTACGGATTTATTATTATGGATGGTAGAGGCGCCCTTTATGGAACTTTAAGTGGAAATTCTAGAGAAGTGCTTTACAAATTCTCAGTTGATCTACCAAAGAAGCATGGCAGAGGAGGACAGTCAGCACTCCGGTTCGATCGTCTGAGGGTCGAAAGTCGTCATAACTACACCTCAAAGACAGCGGAGAAAGCCACTGAGTTATTCATTGATCCAGCAACTAACTTGCCCAATGTTGTTGGCCTGATCCTAGCAGGCTCCGCCGACCTTAAGGCTCAGCTTATTGAGTGCGTTTGA 741 43.72 MMNIKMAEHSETDRNIELWKMKKLIKALETAEGNGTSMISLVISPRDQISRITKMLADEHGKASNIKSRVNRQSVLGAIKSAQQRLKLYNKVPKNGLVVYAGNVITEDGKEKMVIFDLSPMKPINASLYVCDKRFHTEVLTELLQSDDKYGFIIMDGRGALYGTLSGNSREVLYKFSVDLPKKHGRGGQSALRFDRLRVESRHNYTSKTAEKATELFIDPATNLPNVVGLILAGSADLKAQLIECV 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 47961396 47962136 + Bma028323.1 Bma08g00907 87734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00907 246 Gene3D eRF1 domain 1 3 140 IPR024049 -
Bma08g00907 246 SUPERFAMILY Translational machinery components 147 244 - -
Bma08g00907 246 SMART eRF1_1_2 9 145 IPR005140 -
Bma08g00907 246 Pfam eRF1 domain 1 23 143 IPR005140 -
Bma08g00907 246 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 11 145 IPR024049 -
Bma08g00907 246 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 6 242 - -
Bma08g00907 246 Pfam eRF1 domain 2 149 244 IPR005141 -
Bma08g00907 246 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 6 242 IPR004403 GO:0003747|GO:0006415
Bma08g00907 246 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 18 244 IPR004403 GO:0003747|GO:0006415
Bma08g00907 246 Gene3D eRF1 domain 2 141 246 IPR042226 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00907 Bma-Chr8:47961396 Bma14g00378 Bma-Chr14:4533368 2.66E-135 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00907 K03265 - ming:122073088 372.474