Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma08g00907 | ATGATGAACATCAAAATGGCTGAACATTCCGAAACAGATAGGAACATTGAGCTGTGGAAGATGAAGAAGTTGATCAAGGCACTTGAAACTGCAGAAGGAAATGGAACCAGTATGATTTCTCTGGTCATATCTCCCCGCGATCAAATATCTCGAATTACTAAAATGCTGGCGGATGAACACGGAAAGGCTTCAAACATCAAAAGCCGGGTGAATCGACAATCTGTCTTGGGTGCCATTAAGTCTGCTCAGCAGCGGCTCAAGCTGTACAATAAGGTTCCAAAAAATGGACTGGTGGTCTATGCAGGCAATGTCATAACTGAAGATGGGAAGGAAAAGATGGTCATCTTTGATCTCTCACCTATGAAGCCCATTAACGCATCCCTATATGTCTGTGATAAGAGGTTTCATACAGAAGTATTGACTGAACTTCTACAATCTGATGACAAGTACGGATTTATTATTATGGATGGTAGAGGCGCCCTTTATGGAACTTTAAGTGGAAATTCTAGAGAAGTGCTTTACAAATTCTCAGTTGATCTACCAAAGAAGCATGGCAGAGGAGGACAGTCAGCACTCCGGTTCGATCGTCTGAGGGTCGAAAGTCGTCATAACTACACCTCAAAGACAGCGGAGAAAGCCACTGAGTTATTCATTGATCCAGCAACTAACTTGCCCAATGTTGTTGGCCTGATCCTAGCAGGCTCCGCCGACCTTAAGGCTCAGCTTATTGAGTGCGTTTGA | 741 | 43.72 | MMNIKMAEHSETDRNIELWKMKKLIKALETAEGNGTSMISLVISPRDQISRITKMLADEHGKASNIKSRVNRQSVLGAIKSAQQRLKLYNKVPKNGLVVYAGNVITEDGKEKMVIFDLSPMKPINASLYVCDKRFHTEVLTELLQSDDKYGFIIMDGRGALYGTLSGNSREVLYKFSVDLPKKHGRGGQSALRFDRLRVESRHNYTSKTAEKATELFIDPATNLPNVVGLILAGSADLKAQLIECV | 246 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 47961396 | 47962136 | + | Bma028323.1 | Bma08g00907 | 87734 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma08g00907 | 246 | Gene3D | eRF1 domain 1 | 3 | 140 | IPR024049 | - | |
Bma08g00907 | 246 | SUPERFAMILY | Translational machinery components | 147 | 244 | - | - | |
Bma08g00907 | 246 | SMART | eRF1_1_2 | 9 | 145 | IPR005140 | - | |
Bma08g00907 | 246 | Pfam | eRF1 domain 1 | 23 | 143 | IPR005140 | - | |
Bma08g00907 | 246 | SUPERFAMILY | N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | 11 | 145 | IPR024049 | - | |
Bma08g00907 | 246 | PANTHER | EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE | 6 | 242 | - | - | |
Bma08g00907 | 246 | Pfam | eRF1 domain 2 | 149 | 244 | IPR005141 | - | |
Bma08g00907 | 246 | PANTHER | PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 | 6 | 242 | IPR004403 | GO:0003747|GO:0006415 | |
Bma08g00907 | 246 | TIGRFAM | aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms | 18 | 244 | IPR004403 | GO:0003747|GO:0006415 | |
Bma08g00907 | 246 | Gene3D | eRF1 domain 2 | 141 | 246 | IPR042226 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma08g00907 | Bma-Chr8:47961396 | Bma14g00378 | Bma-Chr14:4533368 | 2.66E-135 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma08g00907 | K03265 | - | ming:122073088 | 372.474 |