Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00918 ATGGGGTCTGATCACCCACTGCCCGAATGGGCTTCGAAGCCTTGCATTATGGGTATCGATGAAGCCGGTCGAGGCCCTGTTCTAGGGCCAATGGTTTACGGGTGCTTGTACTGTTCTCGTTCTTATCAGAAGGCTCTTTCATCTTTGAATTTTGCAGATTCAAAGACGTTAAAGGAAGAAAAGAGGGAAGAGCTATTTGAAATTTTGAAAGCTGATGAATCAATTGGATGGGCTGTTGATGTCATAGATCCAAGGGAACTTTCTGCTAAAATGTTAAAGAAAAATAAGATAAATTTGAACGAAATATCACATGACTCTGCAATTGGACTGGTCACAAGGGTCCTAAACCTGGGAGTTCTTCTCACTGAGGTTTATGTGGACACAGTGGGTGATCCTGAAAAGTACAGAATAAAACTCTCGGAAAGATTTCCATCTATCAAATTTGTTGTTGCTAAGAAGGCTGATAGTCTTTATCCAGTCGTGAGTGGAGCGAGCATAGTTGCGAAGGTCACTAGAGACCATGCTTTAAAAGGATGGGTGCTTGGTGAAACTGCTGAAAAAATGCATAGAAATTTTGGTTCTGGATACCCTGGAGATCCTGAGACGAAGGCTTGGTTAGAAGATCACAAACACTCAGTTTTTGGATTTCCGACATTGGTTCGCTTCAGTTGGGGTACATGCAATCCATTTTTCAAAAACATGGTTGAAGTTTTATGGTCAGACGATGAAGACCAAGGTATGAATGGCAGTGTTGGAAAGAAGCAACTGAAGCTAAGCAATGTTGGTTTCACATCATCCAAAAGAAAAAGTGAAGAAGTCGAATCAAATGCTAGAGGGCGCTGTAAGTTCTTCCAGGCTCGAAAACTAGAGCAACTCACTCGCTTCTAA 888 42.0 MGSDHPLPEWASKPCIMGIDEAGRGPVLGPMVYGCLYCSRSYQKALSSLNFADSKTLKEEKREELFEILKADESIGWAVDVIDPRELSAKMLKKNKINLNEISHDSAIGLVTRVLNLGVLLTEVYVDTVGDPEKYRIKLSERFPSIKFVVAKKADSLYPVVSGASIVAKVTRDHALKGWVLGETAEKMHRNFGSGYPGDPETKAWLEDHKHSVFGFPTLVRFSWGTCNPFFKNMVEVLWSDDEDQGMNGSVGKKQLKLSNVGFTSSKRKSEEVESNARGRCKFFQARKLEQLTRF 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 48157401 48164625 + Bma028340.1 Bma08g00918 87745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00918 295 Pfam Ribonuclease HII 17 227 IPR024567 GO:0004523
Bma08g00918 295 Gene3D - 3 186 IPR036397 GO:0003676
Bma08g00918 295 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 14 236 IPR024567 GO:0004523
Bma08g00918 295 Gene3D Ribonuclease hii. Domain 2 187 234 IPR023160 GO:0004523
Bma08g00918 295 PANTHER RIBONUCLEASE H2 SUBUNIT A 7 295 IPR001352 GO:0003723|GO:0004523
Bma08g00918 295 PANTHER RIBONUCLEASE 7 295 - -
Bma08g00918 295 SUPERFAMILY Ribonuclease H-like 15 232 IPR012337 -
Bma08g00918 295 TIGRFAM TIGR00729: ribonuclease HII 16 228 IPR004649 GO:0004523|GO:0016070
Bma08g00918 295 CDD RNase_HII_eukaryota_like 17 236 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00503 Bma-Chr8:26293503 Bma08g00918 Bma-Chr8:48157401 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00918 K10743 - csin:114322663 512.301