Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00921 ATGTCTGCAGCCGGAGCCACGTACATGTTCGCACTGTACTCCGGCGATATAAAATCTGTTCTTGGTTACGATCAAACCACCCTAAATCTTCTCAGTTTCTTCAAAGACTTGGGTGCCAACGTCGGAGTTCTCTCCGGCCTGATAAATGAGGTCACTCCACCGTGGGTGGTCCTGTCCATCGGAGCCGGACTCAACTTTTTCGGTTACTTCATGATTTGGCTAGCCGTAACGAAGAGAATCAAGACGCCGGCGGTATGGCATATGTGTTTGTACATCTGCATCGGAGCAAATTCTCAGTCTTTCGCAAACACTGGTTCGCTCGTCACCTGCGTGAAGAATTTCCCGGAGAGTCGAGGAGTGGTGCTTGGACTTTTGAAAGGGTACGTAGGATTAAGCGGCGCTATTATTACACAGCTTTACCATGGTTTCTATGGAGACGATTCGAAAGCTTTGATTTTGCTCATCGGGTGGCTTCCGGCAGCTATTTCCGTCGCTTTTCTTCGAACTATTCGGATCATGAAAGTTGTCCGGCAGGCGAATGAGCTCAAAGTTTTCTATAATATGCTTTACATTTCGTTGGGCCTCGCTGGGTTTCTCATGGCGATGATTATCTTCCAGAAGCAAGCGCATTTTAACAGGACTGAGTACGGCGGAAGTGCGGCGGCGGTGCTTTTTCTTCTCTTTCTTCCTCTCTCAGTCGTTGTTTTCGAGGAGTATAGTATACTTAAAACGGAGAAGATGAAGACCGAAAACCATCAACCATCTCCTGAGACAGCCATAGCTGTTACTTCTACAAATCCAAATCAAGAAGCAGTGCTGAAAGAGAGAGAGAATCAAACGACCGATGAAATTTCTTGCTGGAAAACCATTTTTAATCCACCGGAAAGAGGCGAAGACTTCACGATTCTTCAAGCACTTTTCAGTATGGACATGCTGATTCTCTTCTTCACAGCTTTATGCGGAGTGGGAGGAACCCTAACCGCCATTGACAACCTGGGTCAGATAGGAGCTTCTCAAGGGTACCCAAAGAAAAGCATAAGCACGTTCGTTTCGCTGGTCAGCATATGGAACTATCTTGGCCGAGTCGTCGCCGGTTTCGTATCGGAAATCTTCCTAACCAAATACAAGTTCCCTCGCCCTCTCATGCTTTCTCTGACCCTCTTACTATCATGTCTCGGCCATCTTCTCATTGCTTTCAACATCCAGAATGGTCTCTACTTCGCCTCCGTAATTATCGGTTTCTGTTTCGGAGCCCAATGGCCCCTACTTTTCGCCATCATTTCTGAACTTTTCGGGCTCAAATACTACTCCACTCTCTACAATTTCGGGTCAGTGGCCAGTCCGATAGGCCTGTACGCCCTGAACGTGAAGGTCGCCGGAAATTTGTACGACAGAGAAGCTAAGAAACAAATGGCTGCTCTAGGGCTTCGCAGAAAAGCCGGGGAGGAGCTGAAATGCATCGGCGGAGAGTGTTTTAAGCTGTCTTTCATAATAATTACTGCAGTGACTTTTCTGGGTACCATTGTTTCTCTGATTTTAGTGATGAGGACGAAGAAAGGGAGCTTCATATCCATTTCAATGGCGTTCTCATCACCCCCTAGCGGAGGATGGAGCCGATCTACTGCCAAATCTTTCGCCGTTCAAACATTCAAAGGGTCATGGTTCATGATCTTCGCCTCCTTTCTGATCATGTCCATGGCCGGAATTCCCTACCTCTTCGCCCTCTACTCCGGTACCATCAAAAGTACGCTCGGCTACGACCAAACCACGTTAAACTTCGTCAGTTTCTTTAAAGATGTCGGAACCACCGTCGGCGTCATCGCAGGACTTATTAACGAAGTCACCCCACCATGGTCGGTGCTCGCCATGGGAGCAGTTCTAAACTTTTTCGGCTATTTTATGATCTGGCTTTCTGTAACGAAGAGAGTTTCGACGAAAGTCTGGCTTATGTGTTTGTACATCTGTGTCGGAGCTAACGCGACGACGTTTGCCAATACCGGAGCTCTGGTCACCTGCGTGAAGTCCTACCCGGAGAGACGAGGGGTTGTGATCGGAATTCTGAAAGGCTATATGGGTTTGAGCGGAGCTATTGTGACTCAACTTTATCATGCCATTTATGGAAACGACGAGGTAAGTTTTCTTCTGTTTCTCGGGTGGCTACCGGCGGCGGTTTCCTTCATTTTCTTGCCGACGGTGAGAGTTATGAAGTTTTCTCACCAGCCAAACGAGCTCAAGGTTTTCTATAATTTCCTCTATATTTCTCTAGGCCTCGCTGGGTTCATCATGCTCATGATTATTCTGCAACAAAAGTTTTCTTTTAATCATAGTGAGTACAGTGGAAGTGCGGCAATGGTGGTTTTCCTTCTCTTACTTCCGTTTGCAGTCGTTCTTTACGAAGAATACAAGCTCTGGAAGAAGAAGATCCTGGCAGTAAACGACCCTTCGCCATTACAGGTCGTAACACAAGAGGCGAAGAACCCAGAAATTTCTCACGAATCTAAGGATTTTCTGACCAAATCAAGCTCGGAGAATCAGCAAGCTGCTCAAAAATGGTGGCAAAATGCGTTTAATCCTCCAAAAAGAGGAGACGACTTTACGATTCTCCAAGCTCTTTTCAGCATCGATATGCTTCTTCTCTTCCTCGCCACCATGTGTGGAGTCGGAGGAACGTTGACCGCCATTGATAACCTCGGACAAATCGGAGCTTCCTTGGATTACCCCAAAAAAAGCATAAGCACCTTCGTCTCTCTCGTTAGCATTTGGAATTATCTCGGCCGAGTTTTCTCCGGTTTCTCCTCCGAAATGCTTCTCACCAAATACAAATTTCCTCGCCCATTGATGCTCACGCTCGTCCTCCTCCTCTCCTGCGTCGGCCACCTTCTCATCGCCTTCAACCCACCAGGCGGCCTCTACATCGCCTCCATTCTCATAGGTTTCTGCTACGGAGCTCAATGGCCATTGCTTTTCTCCATTATTTCGGAAGTTTTCGGACTCAAATACTACGCTACTCTGTACAATTTCGGATCTGTAGCTAGCCCAGTCGGACTTTACGTCCTCAACGTGATCGTTACTGGCCATTTATACGACAAAGAAGCTAATAAACAGCTCTCTGCCCAAAATTTGAAAAGAGAAGAATGGGAAGAACTGGTTTGCAATGGAATTAATTGCTTTAAATTGTCTTTCATAATAATCACCGCCGTCACGCTGTTTGGGACGTTGGTTTCCCTGGTTTTGGTATTGAGGACAAAGAAGTTCTACAAAAGTGATATCTACAAGAAGTTTAGGGAGGAAGAAGCAAAGGTTACGGAGTCGTCAATGGCGGTCGCTGGTTCTAACGGTGCCGTTCAGTTGCAGAAATACGGAGAAAGTAACGGAAAGTCGCTGAACCATTGA 3393 46.77 MSAAGATYMFALYSGDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAGLNFFGYFMIWLAVTKRIKTPAVWHMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGLLKGYVGLSGAIITQLYHGFYGDDSKALILLIGWLPAAISVAFLRTIRIMKVVRQANELKVFYNMLYISLGLAGFLMAMIIFQKQAHFNRTEYGGSAAAVLFLLFLPLSVVVFEEYSILKTEKMKTENHQPSPETAIAVTSTNPNQEAVLKERENQTTDEISCWKTIFNPPERGEDFTILQALFSMDMLILFFTALCGVGGTLTAIDNLGQIGASQGYPKKSISTFVSLVSIWNYLGRVVAGFVSEIFLTKYKFPRPLMLSLTLLLSCLGHLLIAFNIQNGLYFASVIIGFCFGAQWPLLFAIISELFGLKYYSTLYNFGSVASPIGLYALNVKVAGNLYDREAKKQMAALGLRRKAGEELKCIGGECFKLSFIIITAVTFLGTIVSLILVMRTKKGSFISISMAFSSPPSGGWSRSTAKSFAVQTFKGSWFMIFASFLIMSMAGIPYLFALYSGTIKSTLGYDQTTLNFVSFFKDVGTTVGVIAGLINEVTPPWSVLAMGAVLNFFGYFMIWLSVTKRVSTKVWLMCLYICVGANATTFANTGALVTCVKSYPERRGVVIGILKGYMGLSGAIVTQLYHAIYGNDEVSFLLFLGWLPAAVSFIFLPTVRVMKFSHQPNELKVFYNFLYISLGLAGFIMLMIILQQKFSFNHSEYSGSAAMVVFLLLLPFAVVLYEEYKLWKKKILAVNDPSPLQVVTQEAKNPEISHESKDFLTKSSSENQQAAQKWWQNAFNPPKRGDDFTILQALFSIDMLLLFLATMCGVGGTLTAIDNLGQIGASLDYPKKSISTFVSLVSIWNYLGRVFSGFSSEMLLTKYKFPRPLMLTLVLLLSCVGHLLIAFNPPGGLYIASILIGFCYGAQWPLLFSIISEVFGLKYYATLYNFGSVASPVGLYVLNVIVTGHLYDKEANKQLSAQNLKREEWEELVCNGINCFKLSFIIITAVTLFGTLVSLVLVLRTKKFYKSDIYKKFREEEAKVTESSMAVAGSNGAVQLQKYGESNGKSLNH 1130
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 48186928 48193589 - Bma028343.1 Bma08g00921 87748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00921 1130 CDD MFS_Mch1p_like 1 507 - -
Bma08g00921 1130 SUPERFAMILY MFS general substrate transporter 538 733 IPR036259 -
Bma08g00921 1130 SUPERFAMILY MFS general substrate transporter 751 1086 IPR036259 -
Bma08g00921 1130 Pfam Nodulin-like 1 235 IPR010658 -
Bma08g00921 1130 Pfam Nodulin-like 554 796 IPR010658 -
Bma08g00921 1130 Pfam Major Facilitator Superfamily 896 1083 IPR011701 GO:0022857|GO:0055085
Bma08g00921 1130 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 538 1113 - -
Bma08g00921 1130 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 519 - -
Bma08g00921 1130 PANTHER MFS TRANSPORTER 538 1113 - -
Bma08g00921 1130 PANTHER MFS TRANSPORTER 1 519 - -
Bma08g00921 1130 CDD MFS_Mch1p_like 554 1072 - -
Bma08g00921 1130 SUPERFAMILY MFS general substrate transporter 3 519 IPR036259 -
Bma08g00921 1130 Gene3D MFS general substrate transporter like domains 866 1087 IPR036259 -
Bma08g00921 1130 Gene3D MFS general substrate transporter like domains 306 522 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00360 Bma-Chr3:2672057 Bma08g00921 Bma-Chr8:48186928 0 dispersed
Bma08g00921 Bma-Chr8:48186928 Bma12g01012 Bma-Chr12:42196598 4.98E-98 dispersed
Bma13g00691 Bma-Chr13:19159163 Bma08g00921 Bma-Chr8:48186928 1.77E-70 dispersed
Bma11g00195 Bma-Chr11:1750042 Bma08g00921 Bma-Chr8:48186928 0 wgd
Bma03g00062 Bma-Chr3:512202 Bma08g00921 Bma-Chr8:48186928 0 wgd
Bma03g00359 Bma-Chr3:2654455 Bma08g00921 Bma-Chr8:48186928 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00921 - - csv:101205503 830.476