Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00988 TCTTTCCAGCACAAAACCTTTTGGATGCCCAGAGATGCTGGGTGTTTAACTGAAGGAGAGATGGGCTATGATAGTTCTTCCAGAATGGATTCAAAACGTGGGCATCAGTGGTTCATGGATGGCAGTGCTCCAGAACTATTTAGCAGCAAGAAGCAAGCAACAGAAGCAGTAAACAATGGACCTGTACCAGGAGTTTCGCATATGAATGTTTCTCTATGGGATAACTCTTCTGGTTTTCAGTCTGTTCCTGGGCAGTTAAGTGATCGCCTCTTTGGACCTGGACCTATGAGGACTGTCAATCTTGTTGACACAAACATTTCTACCCTTGGACATGGAGATATGCACATAGGAAGAAAGGATTTTGAGAATCAATATGGTAGTGATTCCTCTGTAGGCTTATCCATGTCCCATACTACGGAAGATCCCTCGTCATGTCTGAATTTTGGTGGAATTAGAAAAGTTAAAGTAAATCAAGTAAGGGAATCTGAAAATGCCATGCCAACATCCATAAGACACCCATTCAGTGGAGAAGATAGTGGCACAATGACAATGGGTACCACCTATGGTAAAAATGATGAAAACATTATTTCCTTGGGACAGACTTACCCTAATAGAAATGAGAACATTTCGATAGGCTCTGCATTCAGTAAGGCAGATGATAATTTCATTTCAATGGGTCACACCTTCAATAAGGATGATGCTAATTTCATTTCTATGGGTCAAAACTATAGCAAGGGCGACAATAGGATTTTATCAATGAGTCAGCCCTTTGACAAAGTTGATAGAACCTTTATATCAATGGGTCAGTCATATGAAAAAGCTAATGGAAATGTAGTTTCGCTGCAGACGCCCTACAACAAGGGAAATGGAAATTTTATTTCAATGGGGCCAACTTATGGTAAAGCAAATGAAAATTTCATTTCAATGGCTTCCTCCTATAACAAGGGCACAGGAGAGGCTTTATCAATGGGTACAACCTATGATAAAGTTGATTCTGAATTTGTAACTTTGGGTACTAATTATGAAAGAGGAAACTCTGGGGTTCTATCAATGGGCCACAACTACAATAAGGGCGAGGGGACTACCATATCTTTTGGAGGGTTTGATGACGAACCTGAGACAAATAATCCCTCTGGTGGGATCATCAGTAGCTATGATTTGTTGATGGGCACTCAGCAGTCGGCTCATATCTCAGAAGTATCTATCCAGAAAGATTTTGTGGATTCAAGTGCTGATGGTAGTGTCAACAATTTTATGAAGGCAAACATGGACAACTCAGTAAAAGGTAAAGAGTCAAAGACAACTAAGAAGGTTTCCCCAAATAGTTTCCCTTCAAATGTCAAAAGTTTGTTATCAACTGGTATGCTAGACGGGGTTCCTGTCAAATATGTTTCTTGGTCGAGGGAAAAAAATCTGAAAGGAGTTATAAAAGGAACTGGCTATTTGTGCGACTGTGACAAGTGTATGCAATGTAAGGCTCTCAATGCTTATGAATTTGAGCGTCATGCTGGTTGCAAGACCAAACATCCCAATAATCACATTTATTTTGAGAATGGGAAGACCATATATGCAGTTGTTCAAGAGTTGAAGAACACTCCTCAGGAGATGCTATTTGATGCTATTCAGAACGTGACAGGCTCACCTATTAATCAGAAAAACTTCCGTATATGGAAAGCTTCATATCAAGCTGCCACCCGAGAACTTCAGCGTATTTATGGGACAGATGAAGTAATCATGCCATCTTGA 1746 40.26 SFQHKTFWMPRDAGCLTEGEMGYDSSSRMDSKRGHQWFMDGSAPELFSSKKQATEAVNNGPVPGVSHMNVSLWDNSSGFQSVPGQLSDRLFGPGPMRTVNLVDTNISTLGHGDMHIGRKDFENQYGSDSSVGLSMSHTTEDPSSCLNFGGIRKVKVNQVRESENAMPTSIRHPFSGEDSGTMTMGTTYGKNDENIISLGQTYPNRNENISIGSAFSKADDNFISMGHTFNKDDANFISMGQNYSKGDNRILSMSQPFDKVDRTFISMGQSYEKANGNVVSLQTPYNKGNGNFISMGPTYGKANENFISMASSYNKGTGEALSMGTTYDKVDSEFVTLGTNYERGNSGVLSMGHNYNKGEGTTISFGGFDDEPETNNPSGGIISSYDLLMGTQQSAHISEVSIQKDFVDSSADGSVNNFMKANMDNSVKGKESKTTKKVSPNSFPSNVKSLLSTGMLDGVPVKYVSWSREKNLKGVIKGTGYLCDCDKCMQCKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSPINQKNFRIWKASYQAATRELQRIYGTDEVIMPS 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 48980905 48983060 + Bma028426.1 Bma08g00988 87815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00988 581 PANTHER N-LYSINE METHYLTRANSFERASE 3 581 - -
Bma08g00988 581 PANTHER AUTOIMMUNE REGULATOR 3 581 - -
Bma08g00988 581 Pfam Tify domain binding domain 474 529 IPR032308 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00301 Bma08g00988 CCT
Bma03g00301 Bma08g00988 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00988 Bma-Chr8:48980905 Bma11g00203 Bma-Chr11:1779780 9.74E-17 dispersed
Bma14g00490 Bma-Chr14:5556763 Bma08g00988 Bma-Chr8:48980905 7.33E-25 wgd
Bma03g00301 Bma-Chr3:2266443 Bma08g00988 Bma-Chr8:48980905 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00988 - - csv:101206313 843.573