Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma08g00990 | ATGGCGTGGTTCAGGACTAGTTCTTCCATAGCAAAGCTTGCTATTAAGAGGACTTTATCGCAGGGAGGATCGTATGTCGCCAGGTCAAGGATCATCCAGTCACACAATCGATATTTTCATACCACAGTTTTTAAGTCGAAAGCACAAGCAGCTCCAGTTCCTCGCCCAGTGCCGCTCTCTAGGCTTACTGATAGCTTCTTAGATGGGACAAGCAGTGTCTACCTGGAAGAACTTCAAAGGGCATGGGAGGAGGACCCTAACAGCGTTGATGAGTCATGGGACAACTTCTTTAGAAATTTTGTTGGTCAGGCTTCGACATCACCTGGCATTTCCGGACAGACAATTCAAGAGAGCATGCGTTTGCTTTTGCTTGTCAGGGCGTATCAAGTTAATGGTCATATGAAGGCAAAGTTAGACCCTTTGGGGTTAGAAGAACGCCAAATCCCTGATGATTTGGACCTTGGTCTTTATGGATTCACGGAAGCTGATCTTGATAGGGAGTTCTTTTTAGGGGTATGGAGGATGTCTGGGTTTTTGTCTGAGAACCGCCCAGTGCAGACCCTCAGATCCATATTAACTCGGCTCGAGCAGGCATACTGCGGGAGCATCGGATATGAATATATGCACATTGCAGACAGAGATAAATGTAACTGGTTGAGGGACAAGATCGAGACCCCTACGCCAATGCAATACAACAGGCAACGTCGAGAGGTTATCCTTGATAGACTTATATGGAGTACACAGTTTGAGAATTTCTTAGCTACAAAATGGACAACAGCAAAGAGGTTCGGGGTCATTAGGAATCATCCCTCAGCTCTTCAAATCTACCAAAAGAAGCTCTTGGAATCTGGGCCGGTGACTCAAGAGGATATTGATAAAATACAGAACAAGGTCAATTCAATCCTCAATGAAGAATTCTTGGCTAGCAAAGATTATGTCCCCAAAAGAAGAGACTGGCTTTCAGCCTATTGGTCTGGATTTAAGTCACCTGAACAGCTCTCACGGGTCCGAAATACGGGGGTTAAACCGGAGATCTTGAAGAATGTGGGCAAAGCAGTTACTAACCTACCAGATACTTTCAAGCCTCACAGGGCAGTAAAAAAGGTTTATGAACAGAGAGCACAAATGATTGAATCAGGGGAGGGCATTGATTGGGCACTTGGGGAAGCACTTGCTTTTGCCACATTACTTGTCGAAGGTAATCATGTTAGATTGAGTGGCCAGGATGTTGAAAGAGGTACATTTAGTCATCGTCATTCTGTTATTCACGACCAAGAAACAGGGGAGAAATATTGTCCTCTAGATCATGTTATCATGAACCAGGACGAGGAAATGTTTACTGTTAGCAACAGTTCTCTTTCGGAGTTTGGAGTTCTTGGATTTGAGTTGGGCTACTCGATGGAAAATCCTAATTCTTTGGTAATTTGGGAAGCTCAGTTTGGTGATTTTTCAAATGGGGCGCAAGTGATATTCGATCAGTTCGTGTGCAGTGGGGAATCAAAGTGGCTGCGACAGACTGGACTTGTCCTTTTGCTTCCACATGGTTATGATGGGCAGGGCCCTGAGCATTCGAGTGCACGATTGGAGCGTTTTCTTCAGATGAGTGATGACAATCCTTTTGTTATCCCTGAGATGGAGCCAACTCTTAGGAAGCAGATTCAGGAGTCTAACTGGCAGGTTGTGAATGTTACAACTCCTGCAAACTATTTCCATGTCTTGCGCCGTCAGATACACAGGGACTTTCGAAAACCTTTAATTGTGATGGCTCCTAAAAACCTGCTCCGTCATAAGGACTGTAAATCAAATCTATCTGAGTTTGATGACGTCCAAGGGCACCCAGGTTTTGACAAACAGGGGACCAGATTTAAGCGCCTTATCAAGGATCAGAATGTTCATTCTGATTGTGAAGAGGGCATCAGACGCTTATTACTATGCTCTGGAAAGATTTATTATGAGCTTGATGAGGGGAGGAAAAAAGTTGATGGAAAGGACGTTGCAATATGCAGGGTTGAACAGCTATGTCCCTTCCCTTATGACCTCATCCAGAGAGAGCTAAAACGATATCCGAATGCGGAGGTTGTTTGGTGCCAGGAAGAGCCAATGAATATGGGAGCTTATTCCTATATTTATCCTCGGCTCGGCACCGCCATGAAAGCACTAGGTCGAGGAACAATAGATGACGTCAAATACATTGGTCGTGCTCCATCAGCAGCCACGGCTACTGGTTTCTACCAAGCCCATGTCAAAGAACAATCTGAGCTTGTGCAGAAGGCATTGCAGCCTGAGCCAATCAACTATCCATAG | 2304 | 45.05 | MAWFRTSSSIAKLAIKRTLSQGGSYVARSRIIQSHNRYFHTTVFKSKAQAAPVPRPVPLSRLTDSFLDGTSSVYLEELQRAWEEDPNSVDESWDNFFRNFVGQASTSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEERQIPDDLDLGLYGFTEADLDREFFLGVWRMSGFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDKCNWLRDKIETPTPMQYNRQRREVILDRLIWSTQFENFLATKWTTAKRFGVIRNHPSALQIYQKKLLESGPVTQEDIDKIQNKVNSILNEEFLASKDYVPKRRDWLSAYWSGFKSPEQLSRVRNTGVKPEILKNVGKAVTNLPDTFKPHRAVKKVYEQRAQMIESGEGIDWALGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVIHDQETGEKYCPLDHVIMNQDEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVIWEAQFGDFSNGAQVIFDQFVCSGESKWLRQTGLVLLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMEPTLRKQIQESNWQVVNVTTPANYFHVLRRQIHRDFRKPLIVMAPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNVHSDCEEGIRRLLLCSGKIYYELDEGRKKVDGKDVAICRVEQLCPFPYDLIQRELKRYPNAEVVWCQEEPMNMGAYSYIYPRLGTAMKALGRGTIDDVKYIGRAPSAATATGFYQAHVKEQSELVQKALQPEPINYP | 767 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 48988274 | 48993717 | - | Bma028428.1 | Bma08g00990 | 87817 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma08g00990 | 767 | PANTHER | 2-OXOGLUTARATE DEHYDROGENASE, MITOCHONDRIAL-LIKE | 1 | 265 | - | - | |
Bma08g00990 | 767 | PANTHER | 2-OXOGLUTARATE DEHYDROGENASE, MITOCHONDRIAL-LIKE | 264 | 766 | - | - | |
Bma08g00990 | 767 | SMART | Transket_pyr_3 | 383 | 596 | IPR005475 | - | |
Bma08g00990 | 767 | PANTHER | 2-OXOGLUTARATE DEHYDROGENASE | 264 | 766 | IPR011603 | GO:0004591|GO:0006099|GO:0030976 | |
Bma08g00990 | 767 | Pfam | 2-oxoglutarate dehydrogenase N-terminus | 64 | 102 | IPR032106 | - | |
Bma08g00990 | 767 | PANTHER | 2-OXOGLUTARATE DEHYDROGENASE | 1 | 265 | IPR011603 | GO:0004591|GO:0006099|GO:0030976 | |
Bma08g00990 | 767 | SUPERFAMILY | Thiamin diphosphate-binding fold (THDP-binding) | 152 | 265 | IPR029061 | - | |
Bma08g00990 | 767 | PIRSF | Oxoglu_dh_E1 | 58 | 266 | IPR011603 | GO:0004591|GO:0006099|GO:0030976 | |
Bma08g00990 | 767 | PIRSF | Oxoglu_dh_E1 | 264 | 761 | IPR011603 | GO:0004591|GO:0006099|GO:0030976 | |
Bma08g00990 | 767 | Gene3D | - | 614 | 762 | IPR042179 | - | |
Bma08g00990 | 767 | Gene3D | TPP helical domain | 114 | 201 | - | - | |
Bma08g00990 | 767 | Gene3D | - | 339 | 611 | - | - | |
Bma08g00990 | 767 | Gene3D | - | 202 | 266 | - | - | |
Bma08g00990 | 767 | Pfam | 2-oxoglutarate dehydrogenase C-terminal | 618 | 759 | IPR031717 | - | |
Bma08g00990 | 767 | SUPERFAMILY | Thiamin diphosphate-binding fold (THDP-binding) | 366 | 602 | IPR029061 | - | |
Bma08g00990 | 767 | Pfam | Transketolase, pyrimidine binding domain | 382 | 597 | IPR005475 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma03g00300 | Bma08g00990 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma08g00990 | Bma-Chr8:48988274 | Bma03g00300 | Bma-Chr3:2240766 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma08g00990 | K00164 | - | twl:119988642 | 955.666 |