Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00990 ATGGCGTGGTTCAGGACTAGTTCTTCCATAGCAAAGCTTGCTATTAAGAGGACTTTATCGCAGGGAGGATCGTATGTCGCCAGGTCAAGGATCATCCAGTCACACAATCGATATTTTCATACCACAGTTTTTAAGTCGAAAGCACAAGCAGCTCCAGTTCCTCGCCCAGTGCCGCTCTCTAGGCTTACTGATAGCTTCTTAGATGGGACAAGCAGTGTCTACCTGGAAGAACTTCAAAGGGCATGGGAGGAGGACCCTAACAGCGTTGATGAGTCATGGGACAACTTCTTTAGAAATTTTGTTGGTCAGGCTTCGACATCACCTGGCATTTCCGGACAGACAATTCAAGAGAGCATGCGTTTGCTTTTGCTTGTCAGGGCGTATCAAGTTAATGGTCATATGAAGGCAAAGTTAGACCCTTTGGGGTTAGAAGAACGCCAAATCCCTGATGATTTGGACCTTGGTCTTTATGGATTCACGGAAGCTGATCTTGATAGGGAGTTCTTTTTAGGGGTATGGAGGATGTCTGGGTTTTTGTCTGAGAACCGCCCAGTGCAGACCCTCAGATCCATATTAACTCGGCTCGAGCAGGCATACTGCGGGAGCATCGGATATGAATATATGCACATTGCAGACAGAGATAAATGTAACTGGTTGAGGGACAAGATCGAGACCCCTACGCCAATGCAATACAACAGGCAACGTCGAGAGGTTATCCTTGATAGACTTATATGGAGTACACAGTTTGAGAATTTCTTAGCTACAAAATGGACAACAGCAAAGAGGTTCGGGGTCATTAGGAATCATCCCTCAGCTCTTCAAATCTACCAAAAGAAGCTCTTGGAATCTGGGCCGGTGACTCAAGAGGATATTGATAAAATACAGAACAAGGTCAATTCAATCCTCAATGAAGAATTCTTGGCTAGCAAAGATTATGTCCCCAAAAGAAGAGACTGGCTTTCAGCCTATTGGTCTGGATTTAAGTCACCTGAACAGCTCTCACGGGTCCGAAATACGGGGGTTAAACCGGAGATCTTGAAGAATGTGGGCAAAGCAGTTACTAACCTACCAGATACTTTCAAGCCTCACAGGGCAGTAAAAAAGGTTTATGAACAGAGAGCACAAATGATTGAATCAGGGGAGGGCATTGATTGGGCACTTGGGGAAGCACTTGCTTTTGCCACATTACTTGTCGAAGGTAATCATGTTAGATTGAGTGGCCAGGATGTTGAAAGAGGTACATTTAGTCATCGTCATTCTGTTATTCACGACCAAGAAACAGGGGAGAAATATTGTCCTCTAGATCATGTTATCATGAACCAGGACGAGGAAATGTTTACTGTTAGCAACAGTTCTCTTTCGGAGTTTGGAGTTCTTGGATTTGAGTTGGGCTACTCGATGGAAAATCCTAATTCTTTGGTAATTTGGGAAGCTCAGTTTGGTGATTTTTCAAATGGGGCGCAAGTGATATTCGATCAGTTCGTGTGCAGTGGGGAATCAAAGTGGCTGCGACAGACTGGACTTGTCCTTTTGCTTCCACATGGTTATGATGGGCAGGGCCCTGAGCATTCGAGTGCACGATTGGAGCGTTTTCTTCAGATGAGTGATGACAATCCTTTTGTTATCCCTGAGATGGAGCCAACTCTTAGGAAGCAGATTCAGGAGTCTAACTGGCAGGTTGTGAATGTTACAACTCCTGCAAACTATTTCCATGTCTTGCGCCGTCAGATACACAGGGACTTTCGAAAACCTTTAATTGTGATGGCTCCTAAAAACCTGCTCCGTCATAAGGACTGTAAATCAAATCTATCTGAGTTTGATGACGTCCAAGGGCACCCAGGTTTTGACAAACAGGGGACCAGATTTAAGCGCCTTATCAAGGATCAGAATGTTCATTCTGATTGTGAAGAGGGCATCAGACGCTTATTACTATGCTCTGGAAAGATTTATTATGAGCTTGATGAGGGGAGGAAAAAAGTTGATGGAAAGGACGTTGCAATATGCAGGGTTGAACAGCTATGTCCCTTCCCTTATGACCTCATCCAGAGAGAGCTAAAACGATATCCGAATGCGGAGGTTGTTTGGTGCCAGGAAGAGCCAATGAATATGGGAGCTTATTCCTATATTTATCCTCGGCTCGGCACCGCCATGAAAGCACTAGGTCGAGGAACAATAGATGACGTCAAATACATTGGTCGTGCTCCATCAGCAGCCACGGCTACTGGTTTCTACCAAGCCCATGTCAAAGAACAATCTGAGCTTGTGCAGAAGGCATTGCAGCCTGAGCCAATCAACTATCCATAG 2304 45.05 MAWFRTSSSIAKLAIKRTLSQGGSYVARSRIIQSHNRYFHTTVFKSKAQAAPVPRPVPLSRLTDSFLDGTSSVYLEELQRAWEEDPNSVDESWDNFFRNFVGQASTSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEERQIPDDLDLGLYGFTEADLDREFFLGVWRMSGFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDKCNWLRDKIETPTPMQYNRQRREVILDRLIWSTQFENFLATKWTTAKRFGVIRNHPSALQIYQKKLLESGPVTQEDIDKIQNKVNSILNEEFLASKDYVPKRRDWLSAYWSGFKSPEQLSRVRNTGVKPEILKNVGKAVTNLPDTFKPHRAVKKVYEQRAQMIESGEGIDWALGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVIHDQETGEKYCPLDHVIMNQDEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVIWEAQFGDFSNGAQVIFDQFVCSGESKWLRQTGLVLLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMEPTLRKQIQESNWQVVNVTTPANYFHVLRRQIHRDFRKPLIVMAPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNVHSDCEEGIRRLLLCSGKIYYELDEGRKKVDGKDVAICRVEQLCPFPYDLIQRELKRYPNAEVVWCQEEPMNMGAYSYIYPRLGTAMKALGRGTIDDVKYIGRAPSAATATGFYQAHVKEQSELVQKALQPEPINYP 767
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 48988274 48993717 - Bma028428.1 Bma08g00990 87817
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00990 767 PANTHER 2-OXOGLUTARATE DEHYDROGENASE, MITOCHONDRIAL-LIKE 1 265 - -
Bma08g00990 767 PANTHER 2-OXOGLUTARATE DEHYDROGENASE, MITOCHONDRIAL-LIKE 264 766 - -
Bma08g00990 767 SMART Transket_pyr_3 383 596 IPR005475 -
Bma08g00990 767 PANTHER 2-OXOGLUTARATE DEHYDROGENASE 264 766 IPR011603 GO:0004591|GO:0006099|GO:0030976
Bma08g00990 767 Pfam 2-oxoglutarate dehydrogenase N-terminus 64 102 IPR032106 -
Bma08g00990 767 PANTHER 2-OXOGLUTARATE DEHYDROGENASE 1 265 IPR011603 GO:0004591|GO:0006099|GO:0030976
Bma08g00990 767 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 152 265 IPR029061 -
Bma08g00990 767 PIRSF Oxoglu_dh_E1 58 266 IPR011603 GO:0004591|GO:0006099|GO:0030976
Bma08g00990 767 PIRSF Oxoglu_dh_E1 264 761 IPR011603 GO:0004591|GO:0006099|GO:0030976
Bma08g00990 767 Gene3D - 614 762 IPR042179 -
Bma08g00990 767 Gene3D TPP helical domain 114 201 - -
Bma08g00990 767 Gene3D - 339 611 - -
Bma08g00990 767 Gene3D - 202 266 - -
Bma08g00990 767 Pfam 2-oxoglutarate dehydrogenase C-terminal 618 759 IPR031717 -
Bma08g00990 767 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 366 602 IPR029061 -
Bma08g00990 767 Pfam Transketolase, pyrimidine binding domain 382 597 IPR005475 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bma03g00300 Bma08g00990 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00990 Bma-Chr8:48988274 Bma03g00300 Bma-Chr3:2240766 0 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00990 K00164 - twl:119988642 955.666