Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00994 ATGACAGGAAAGGGAGAGGGACCTGCAATCGGAATCGATCTTGGAACGACCTACTCGTGCGTCGGAGTATGGCAGCACGATAGGGTGGAAATCATTGCCAACGACCAAGGCAACAGAACGACGCCGTCCTATGTTGGTTTCACAGACACGGAGCGACTGATCGGAGATGCGGCCAAGAACCAAGTTGCAATGAACCCCATTAACACAGTTTTTGATGCTAAGCGTCTGATCGGTAGGAGATTTAGCGATACAACCGTTCAAAACGATATAAAACTCTGGCCATTCAAGGTTATTGCTGGCCCCGGAGACAAGCCCATGATTGTTGTCAATTACAAGGGTGAAGAGAGGCAATTTTCTGCAGAAGAAATCTCGTCTATGGTGCTTATTAAGATGAAGGAGATAGCCGAGGCTTACCTTGGAACTACTGTGAAGAATGCCGTCGTGACTGTCCCTGCTTATTTCAATGACTCCCAACGTCAAGCAACGAAAGACGCTGGAGTCATCGCTGGTCTTAATGTCATGCGGATTATTAATGAACCTACTGCAGCCGCCATTGCATATGGTCTTGACAAGAAGGCTACAAGCTCTGGAGAGAAAAATGTGCTGATTTTTGACTTGGGAGGTGGCACTTTTGATGTCTCGTTGCTCACAATTGAAGAGGGGATCTTTGAGGTGAAAGCTACTGCCGGAGACACTCATCTTGGAGGGGAGGACTTTGATAATAGATTGGTGAATCACTTTGTCCAGGAGTTTAAGAGGAAGCATAAGAAGGATATTAGTGGAAATCCTCGAGCACTTAGGAGACTGAGAACTGCCTGTGAGAGGGCGAAGAGAACTCTTTCGTCCACTGCCCAGACCACGATTGAGATTGATTCTTTGTACGATGGTATTGACTTTTATTCAACAATTACTCGTGCGAGATTTGAGGAACTCAACATGGATCTGTTCAGGAAATGTATGGAGCCTGTCGAGAAGTGTTTGAGGGATGCCAAGATGGACAAAAGTTCTGTCCATGATGTTGTTCTTGTCGGTGGTTCTACAAGAATTCCTAAAGTTCAGCAGCTGTTGCAGGATTTCTTCAACGGGAAGGAGCTCTGCAAGAGCATCAACCCAGATGAGGCTGTGGCTTACGGCGCTGCTGTTCAGGCTGCCATTTTGAGTGGCGAAGGTAATGAGAAAGTGCAGGACTTGTTACTCTTGGATGTCACTCCCCTGTCTCAAGGTTTAGAGACGGCTGGAGGTGTGATGACTGTCTTAATTCCGAGAAATACGACAATCCCGACGAAGAAAGAGCAAGTCTTCTCGACCTATTCAGACAACCAACCAGGCGTTTTGATTCAGGTTTACGAGGGTGAGAGAGCAAGGACGAGGGACAATAACTTGTTGGGCAAATTTGAGCTTTCTGGCATTCCTCCTGCGCCCAGGGGTGTTCCTCAAATTACTGTCTGCTTTGACATTGACGCCAACGGAATCCTAAATGTTTCTGCGGAGGACAAAACTACAGGCCAGAAGAACAAGATTACAATAACCAACGACAAGGGAAGGCTATCAAAGGACGAGATCGAGAAGATGGTCCAGGAGGCGGAGAAGTATAAAGTCGAGGACGAAGAGCACAAGAAGAAAGTCGATTCCAAGAATGCATTGGAGAATTATGCTTACAACATGAGGAACACCATCAAAGACGAGAAGATCGGTTCTAAGCTGGATCCCGCAGAGAAGAAGAAGATCGAGGATGCAATCGAAAAGGCAATTCAGTGGTTGGAGAGCAACCAGCTAGCGGAAGCTGATGAGTTTGAAGATAAAATGAAAGAGCTGGAAAGCATTTGCAATCCCATCATCGCCAAGATGTACCAAGGCGCAGCAGCTCCTGGCACGGCCGGTGGCATGGATTATGATGAAGCTCCGCCGACGGGTACGGGCGGTGCTGGCCCCAAAATTGAAGAAGTTGATTAA 1953 47.26 MTGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDTTVQNDIKLWPFKVIAGPGDKPMIVVNYKGEERQFSAEEISSMVLIKMKEIAEAYLGTTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYDGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKVEDEEHKKKVDSKNALENYAYNMRNTIKDEKIGSKLDPAEKKKIEDAIEKAIQWLESNQLAEADEFEDKMKELESICNPIIAKMYQGAAAPGTAGGMDYDEAPPTGTGGAGPKIEEVD 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 49032753 49035058 + Bma028433.1 Bma08g00994 87821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00994 650 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 629 - -
Bma08g00994 650 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Bma08g00994 650 Coils Coil 588 608 - -
Bma08g00994 650 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Bma08g00994 650 Gene3D Actin; Chain A, domain 4 235 318 - -
Bma08g00994 650 Coils Coil 521 541 - -
Bma08g00994 650 Gene3D - 10 384 - -
Bma08g00994 650 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Bma08g00994 650 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Bma08g00994 650 Gene3D - 545 619 IPR029048 -
Bma08g00994 650 PRINTS 70kDa heat shock protein signature 8 21 - -
Bma08g00994 650 PRINTS 70kDa heat shock protein signature 36 48 - -
Bma08g00994 650 PRINTS 70kDa heat shock protein signature 337 353 - -
Bma08g00994 650 PRINTS 70kDa heat shock protein signature 477 493 - -
Bma08g00994 650 PRINTS 70kDa heat shock protein signature 58 66 - -
Bma08g00994 650 PRINTS 70kDa heat shock protein signature 146 166 - -
Bma08g00994 650 PRINTS 70kDa heat shock protein signature 209 219 - -
Bma08g00994 650 PRINTS 70kDa heat shock protein signature 396 415 - -
Bma08g00994 650 PRINTS 70kDa heat shock protein signature 369 389 - -
Bma08g00994 650 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Bma08g00994 650 MobiDBLite consensus disorder prediction 623 650 - -
Bma08g00994 650 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Bma08g00994 650 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Bma08g00994 650 Gene3D - 71 126 - -
Bma08g00994 650 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Bma08g00994 650 PANTHER HEAT SHOCK PROTEIN 70KDA 1 629 IPR013126 GO:0005524|GO:0140662
Bma08g00994 650 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Bma08g00994 650 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Bma08g00994 650 Gene3D - 192 366 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00660 Bma-Chr1:6017630 Bma08g00994 Bma-Chr8:49032753 4.13E-59 dispersed
Bma08g00994 Bma-Chr8:49032753 Bma10g00293 Bma-Chr10:2671676 0 dispersed
Bma09g00928 Bma-Chr9:48669199 Bma08g00994 Bma-Chr8:49032753 1.99E-87 dispersed
Bma15g00380 Bma-Chr15:4238226 Bma08g00994 Bma-Chr8:49032753 2.17E-87 dispersed
Bma06g01551 Bma-Chr6:51840576 Bma08g00994 Bma-Chr8:49032753 3.67E-85 transposed
Bma06g01631 Bma-Chr6:52422748 Bma08g00994 Bma-Chr8:49032753 3.30E-85 transposed
Bma07g00731 Bma-Chr7:19203020 Bma08g00994 Bma-Chr8:49032753 0 transposed
Bma05g00839 Bma-Chr5:45774111 Bma08g00994 Bma-Chr8:49032753 0 transposed
Bma01g01879 Bma-Chr1:69104163 Bma08g00994 Bma-Chr8:49032753 0 wgd
Bma03g00124 Bma-Chr3:948990 Bma08g00994 Bma-Chr8:49032753 0 wgd
Bma04g00660 Bma-Chr4:6354896 Bma08g00994 Bma-Chr8:49032753 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00994 K03283 - vvi:100259551 1181.78