Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g01008 ATGGCGAATCGATGGTGGGCGGGTAACGTAGCAATGAGAGGCGTGAACGCCGTGTCTTCGTCTCCTTCGTTTCACATGAGCAACGCAGAAGAAGAGAGTGGAGGACTGAACTGGTTTGGACCGAGAAGAGAGCAAGAGCTATTCATGGATTCTCACGCGAACTCAACCCCTACAAACAGTAGCACAAGCAACCCCGATTCCGCTCCTCAGAAACATAGCGATGATAGCCGGGAAAATTATCAGGAAGCTGAAGATCCAATCCCCGGCGGCCATGAGGGCGTCGAACCAGGTAGTACCAGCATCACTCGCCGGCCTCGTGGGAGACCTCCAGGGTCCAAAAACAAGCCGAAACCACCAGTCATCGTTACTAAAGAAAGCCCAAATGCTCTCCGAAGCCACGTATTGGAAATCAGCACGGGCTGCGACATTGTTGAAAGCATCGCCACCTTCGCCCAACGCCGTCACCGGGGTGTCTCCGTTCTGAGCGGCAGCGGCATTGTCACAAACGTCTCTTTCCGGCAACCTGGTGCACCAGACGGGGTCATCACTCTCCCTGGCCGATTCGAAATTCTGTCTCTATCTGGTGCATTTTTACCAGCCCCAGCTCCTCCCGGAGCTACTGGGTTGACCGTATACTTAGCAGGAGCACAAGGTCAGGTGGTCGGTGGGACAGTGGTGGGTTCACTCATGGCTTCCAGCCTGGTAATGGTGATCGCGGCAACATTCACAAATGCAACTTACGAGCGACTGCCAATCGAAGATGAGCAGCAAAACAACGATCAGACAACTCCATTACAGGCGCAACCAGTATCTCATAGCATCGGCGAACAACCTATACTGCCAATCTACAATGCGCCGCCTAATTTCACACCAAACGGTCAGATGCCTCCTGATGTTTTCTGGGTTTCTCCTACTCGTCCCCCTCCCTCCTTCTAA 936 53.53 MANRWWAGNVAMRGVNAVSSSPSFHMSNAEEESGGLNWFGPRREQELFMDSHANSTPTNSSTSNPDSAPQKHSDDSRENYQEAEDPIPGGHEGVEPGSTSITRRPRGRPPGSKNKPKPPVIVTKESPNALRSHVLEISTGCDIVESIATFAQRRHRGVSVLSGSGIVTNVSFRQPGAPDGVITLPGRFEILSLSGAFLPAPAPPGATGLTVYLAGAQGQVVGGTVVGSLMASSLVMVIAATFTNATYERLPIEDEQQNNDQTTPLQAQPVSHSIGEQPILPIYNAPPNFTPNGQMPPDVFWVSPTRPPPSF 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 49104811 49105746 - Bma028446.1 Bma08g01008 87835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g01008 311 SUPERFAMILY AF0104/ALDC/Ptd012-like 127 256 - -
Bma08g01008 311 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 9 311 IPR014476 GO:0003680
Bma08g01008 311 MobiDBLite consensus disorder prediction 20 127 - -
Bma08g01008 311 Gene3D - 130 261 - -
Bma08g01008 311 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 9 311 - -
Bma08g01008 311 ProSiteProfiles PPC domain profile profile. 127 265 IPR005175 -
Bma08g01008 311 MobiDBLite consensus disorder prediction 50 69 - -
Bma08g01008 311 CDD DUF296 131 216 IPR005175 -
Bma08g01008 311 MobiDBLite consensus disorder prediction 70 89 - -
Bma08g01008 311 Pfam Plants and Prokaryotes Conserved (PCC) domain 131 244 IPR005175 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00284 Bma08g01008 CCT
Bma08g01108 Bma08g01008 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00746 Bma-Chr4:8030831 Bma08g01008 Bma-Chr8:49104811 1.30E-73 dispersed
Bma05g01075 Bma-Chr5:49485995 Bma08g01008 Bma-Chr8:49104811 7.75E-77 dispersed
Bma07g00944 Bma-Chr7:35383210 Bma08g01008 Bma-Chr8:49104811 3.20E-69 dispersed
Bma08g01008 Bma-Chr8:49104811 Bma02g01165 Bma-Chr2:53776721 2.01E-72 dispersed
Bma03g00140 Bma-Chr3:1061309 Bma08g01008 Bma-Chr8:49104811 6.40E-120 wgd
Bma03g00284 Bma-Chr3:2105603 Bma08g01008 Bma-Chr8:49104811 6.37E-171 wgd
Bma08g01008 Bma-Chr8:49104811 Bma08g01108 Bma-Chr8:50062189 9.09E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g01008 - - qsu:112039774 377.481