Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g01023 ATGACGAATCCATCTTCCTCCATCGCCGGCTTTACCGTTGCCGTTGCTGTGGTTATCATCGTCTTGTCCGATTTTATCTACCCAATTCATGCTCTCGGCTCCGGCTCCACCCTGGCTGTCAGCTATGGCTCCGGCACAGTGTGCGGCATCGTCGCCGAGCAGCCGACGCGGCGGATTGAATGCTACCGTAACGGACGAACCTTTTTCGTCGAACCCAATATCTCATTCTCGTCCATTTCCGGTGGCCGAAACTTCTTTTGCGGCCTGAGAACCGGAGGCTACAGTCTGCACTGTTGGGACTACAGATTTTCGGATGCCACCTTTTCCAGAAAAAGAATTTACGTCAGCGACTCTGTTTTGTTGGATGATATAGCAATTGGAGACGATCAAGTTTGTGCTACGATGAGGGATACCGGCGGCCTGCATTGCTGGCGAGGAGGTAACGATTTGGTCAAACCTCGGTCTGGTCCATTCGCTTCAATCTCAGCTGGGTTTGGTTTTTCTTGCGGGATTTTGAAGAATGGGTCTGTTCGTTGTTGGGGAAATAATTCGATTGCCAATCATATTGAAAGTGGGTTCAGGAATACATCTATGTTGAGCATTGTAGCCGGAGGTTCTCATGCCTGTGGTATTGATATTTCGGGGATTTTGATTTGCAGAGGAAATAACGATGGAGGACAGTTGAATAATCCATCGAATTCTGGACTGGAGTTCTCCGAATTGGCTCTCGGAGAGAGCCACAGCTGTGGAATTCGACAACGGAATCGATCAGTTGTATGTTGGGGAGGCGGACAGTTTTCTGCCGGTGGAGTTGCCGGAATTTCGTTTGAGCGAATTGTTTCAGGCCCCAATTTTACTTGTGGATTAACGACGAGCAATCTCTCAGTTATTTGCTGGGGAGCAGGGTGGCCGAATAGCTCCGGTTCCAATTTAGGGCTAGAGCTTCCATTGTCGAAAATTCTTCCAGGGCCTTGTGTTCTTTCTCCCTGCTCAGATTGTGGAATTTACCCTCTTTCTCAAACTCTCTGTTCTGGTTCTGGAAATATATGTCAAGAATGCAGGATTCCAATTTCACTTTCAGAGCCTCCGTCGTCTCCTCCTTGGCCATCTCCGTCCAGTTCTTTCTCAAAGAGTTTGTTTGTCTTCGCCATTGTTGGTTCCGTCGGATCTTTTGTCGGCATCTGCACTATCGTTTACTGTCTGTGGACCGGCGTTTGTTTTGGAAACAATAAAATTCACAATTCGGTTCAACCCCAAATCACAAGAACGGCGAGCTCTAATGGCGGAACGACGTCAAACACCAACAACAGCCAACCGTCGAGATCGTCAAGCATCAAACGACAAGGGTCTAGACTCGTGAGACGTCAGAGAAGCGGAACATCAATTAAACACGCAGAAAGAGCCGAGGAATTCTCATTTGCAGAGCTTGCAACTGCAACCAACAACTTCAGTGCAGACAACAAGCTCGGAGCCGGAAGCTTCGGCACCGTGTATAGAGGAAAATTACAGGACGGGAGAGAGGTCGCCATTAAAAGAGGCGAAACAGGGACGAAAACGAAGAAGTTCCAGGAGAAAGAGAGTGCATTTGATTCAGAAGTAGCCTTCTTATCACGCCTCCACCATAAACACTTGGTCGGACTGGTCGGGTACTGCGAGGAGAGAGACGAGAGACTCTTGGTTTATGAATACATGAAAAACGGAGCTCTACACGATCACCTTCACGACAAGAACAACACAGAGAAGAGCAGCAGCGCTGTAAATTCTTGGAAAATGAGGATTAAAATTGCTTTAGATGCTGCTAGAGGGATCGAGTATCTCCACAATTACGCAGTCCCGCCCATAATCCACAGAGACATCAAATCCTCCAACATTTTGCTCGACGCCGCTTGGTCGGCCAGAGTGTCGGATTTCGGATTATCGCTAATGAGTCCGGAGTCCATACCAGATTACCGGCCGATGAAAGCCGTCGGAACTGTGGGTTACATCGATCCAGAGTACTATGGCCTGAATGTGTTGACAGCAAAGAGCGACGTCTACGGGCTTGGGGTAGTTCTACTGGAGCTATTAACGGGAAAGCGAGCCATATTCAAAAACGGGACAGACGAAGGATTGCCGGTGTGTGTGGTGGACTTTGCGGTGCCTCCGATCATGATGGGCGAGATGGGGAAGGTCCTTGACCCCAGAGTTGGGCCGCCGGAGTTAAACGTAACGGAAGCGGTGGAGCTAATGGGTTATACGGCAATGCACTGTGTTAACATGGAAGGAAAAGAAAGACCTACGATGACCGACATTGTCGCCAACTTGGAACGCGCATTGGCCCTCTGTCATGGAAGCCATGGCAGCATTTCCAGTGATGCGATGAGCATAGTTGCAGAGTAA 2379 49.05 MTNPSSSIAGFTVAVAVVIIVLSDFIYPIHALGSGSTLAVSYGSGTVCGIVAEQPTRRIECYRNGRTFFVEPNISFSSISGGRNFFCGLRTGGYSLHCWDYRFSDATFSRKRIYVSDSVLLDDIAIGDDQVCATMRDTGGLHCWRGGNDLVKPRSGPFASISAGFGFSCGILKNGSVRCWGNNSIANHIESGFRNTSMLSIVAGGSHACGIDISGILICRGNNDGGQLNNPSNSGLEFSELALGESHSCGIRQRNRSVVCWGGGQFSAGGVAGISFERIVSGPNFTCGLTTSNLSVICWGAGWPNSSGSNLGLELPLSKILPGPCVLSPCSDCGIYPLSQTLCSGSGNICQECRIPISLSEPPSSPPWPSPSSSFSKSLFVFAIVGSVGSFVGICTIVYCLWTGVCFGNNKIHNSVQPQITRTASSNGGTTSNTNNSQPSRSSSIKRQGSRLVRRQRSGTSIKHAERAEEFSFAELATATNNFSADNKLGAGSFGTVYRGKLQDGREVAIKRGETGTKTKKFQEKESAFDSEVAFLSRLHHKHLVGLVGYCEERDERLLVYEYMKNGALHDHLHDKNNTEKSSSAVNSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDAAWSARVSDFGLSLMSPESIPDYRPMKAVGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNGTDEGLPVCVVDFAVPPIMMGEMGKVLDPRVGPPELNVTEAVELMGYTAMHCVNMEGKERPTMTDIVANLERALALCHGSHGSISSDAMSIVAE 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 49338283 49340661 - Bma028460.1 Bma08g01023 87850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g01023 792 Pfam Protein kinase domain 485 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g01023 792 SUPERFAMILY Protein kinase-like (PK-like) 465 768 IPR011009 -
Bma08g01023 792 Pfam Regulator of chromosome condensation (RCC1) repeat 159 184 - -
Bma08g01023 792 MobiDBLite consensus disorder prediction 421 447 - -
Bma08g01023 792 ProSiteProfiles Protein kinase domain profile. 483 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g01023 792 Gene3D - 70 430 IPR009091 -
Bma08g01023 792 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 9 789 - -
Bma08g01023 792 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 9 789 IPR044815 GO:0004674
Bma08g01023 792 Gene3D Transferase(Phosphotransferase) domain 1 564 779 - -
Bma08g01023 792 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Bma08g01023 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Bma08g01023 792 SUPERFAMILY RCC1/BLIP-II 43 303 IPR009091 -
Bma08g01023 792 MobiDBLite consensus disorder prediction 421 463 - -
Bma08g01023 792 SMART serkin_6 483 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g01023 792 Gene3D Phosphorylase Kinase; domain 1 444 563 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g01023 Bma-Chr8:49338283 Bma03g01561 Bma-Chr3:51976003 7.23E-70 dispersed
Bma01g02645 Bma-Chr1:83948507 Bma08g01023 Bma-Chr8:49338283 1.23E-139 transposed
Bma02g00992 Bma-Chr2:50439777 Bma08g01023 Bma-Chr8:49338283 5.94E-106 transposed
Bma04g00609 Bma-Chr4:5832638 Bma08g01023 Bma-Chr8:49338283 4.80E-65 transposed
Bma03g00250 Bma-Chr3:1937533 Bma08g01023 Bma-Chr8:49338283 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66676 PF00069 Pkinase 1.40E-43 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g01023 - - bhj:120081574 1070.84