Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g01042 ATGGCTACTTCTTTTACTTGTTCAACTTCCAAGTTAGCCACTGTAGTTATCTTTGTTTTGTTCCTGGGTTTTCCTGGCTATGCCAGAGCTCAACTTTCCACCAACTTTTACTCCAGTTCTTGCCCACAACTTCTCTCCACCGTCAAGTCTGCCGTCCAATCTGCTGTGTCGAACGAGGCTCGGATGGGAGCTTCTCTCCTGCGTTTGTTCTTCCATGACTGTTTCGTCAATGGTTGTGACGGGTCAGTTCTACTCGACGACACAACGACCTTCACCGGAGAGCAGACTGCTCTTCCGAACATTAACTCAGCCCGGGGGTTTGACGTGATTGACAGCATAAAAGCGGCGGTGGAGAAGGTCTGCCCCGGCGTGGTTTCATGCGCTGATATATTGGCTATTGCAGCTCGTGATTCTGTTACAATTCTGAAAGGCCCTAGCTGGGACGTAAAACTTGGAAGAAGAGACGCTTTGACAGCAAGCTTTTCTGACGCCAACAATGGCATACCGGCTCCATCTTCTAATCTAAGCGCGTTCATCGCTCGATTCGGTAATCTTGGCCTTTCCACTACGGACTTGGTCTCTTTGTCTGGTGCGCACACTATTGGACAAGCGAGGTGCGTAACCTTCAGAGGCCGCATATACAACGACTCCAACATCGACCCTTCCTTCGCCCAAACCAGACAATCCAACTGTCCGAGGACTGCAGGCTCCGGCGACGACAATCTGGCTCCTCTTGACCTTCAAACTCCCATCGTTTTTGACACCAAATTCTATAAAAACCTCCTCAATAAGAAGGGTCTTCTCCACTCCGATCAGGAATTGTTCAACGGTGGTCCCACTGATTCCTTGGTAGCTACCTACAGCAATAGCGAAAGCTCGTTCTTCTCTGCTTTTACTTCTGCCATGATCAAGATGGGAGATATCAGCCCCCTTACTGGATCAAACGGTGAGATCAGGGAGAACTGTGGGAGAGTTAACTAA 981 49.34 MATSFTCSTSKLATVVIFVLFLGFPGYARAQLSTNFYSSSCPQLLSTVKSAVQSAVSNEARMGASLLRLFFHDCFVNGCDGSVLLDDTTTFTGEQTALPNINSARGFDVIDSIKAAVEKVCPGVVSCADILAIAARDSVTILKGPSWDVKLGRRDALTASFSDANNGIPAPSSNLSAFIARFGNLGLSTTDLVSLSGAHTIGQARCVTFRGRIYNDSNIDPSFAQTRQSNCPRTAGSGDDNLAPLDLQTPIVFDTKFYKNLLNKKGLLHSDQELFNGGPTDSLVATYSNSESSFFSAFTSAMIKMGDISPLTGSNGEIRENCGRVN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 49536459 49537707 + Bma028476.1 Bma08g01042 87869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g01042 326 Gene3D Peroxidase, domain 2 169 305 - -
Bma08g01042 326 ProSiteProfiles Plant heme peroxidase family profile. 31 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Bma08g01042 326 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 CDD secretory_peroxidase 31 325 IPR033905 GO:0004601|GO:0042744
Bma08g01042 326 PANTHER PEROXIDASE 7 325 - -
Bma08g01042 326 PANTHER PEROXIDASE 72-RELATED 7 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 SUPERFAMILY Heme-dependent peroxidases 31 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 Gene3D - 35 322 - -
Bma08g01042 326 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g01042 326 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Bma08g01042 326 Pfam Peroxidase 48 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00047 Bma-Chr7:1376522 Bma08g01042 Bma-Chr8:49536459 2.95E-52 dispersed
Bma08g01042 Bma-Chr8:49536459 Bma14g01739 Bma-Chr14:37375870 8.58E-126 dispersed
Bma11g00063 Bma-Chr11:744759 Bma08g01042 Bma-Chr8:49536459 1.46E-108 dispersed
Bma13g00585 Bma-Chr13:12757631 Bma08g01042 Bma-Chr8:49536459 3.93E-81 dispersed
Bma14g01740 Bma-Chr14:37379297 Bma08g01042 Bma-Chr8:49536459 6.83E-106 dispersed
Bma08g01042 Bma-Chr8:49536459 Bma08g01044 Bma-Chr8:49563218 0 proximal
Bma01g01918 Bma-Chr1:70693447 Bma08g01042 Bma-Chr8:49536459 7.72E-64 transposed
Bma02g00936 Bma-Chr2:49244388 Bma08g01042 Bma-Chr8:49536459 3.34E-95 transposed
Bma03g01281 Bma-Chr3:22784571 Bma08g01042 Bma-Chr8:49536459 2.53E-116 transposed
Bma05g00136 Bma-Chr5:4177287 Bma08g01042 Bma-Chr8:49536459 2.14E-105 transposed
Bma06g00110 Bma-Chr6:1540628 Bma08g01042 Bma-Chr8:49536459 6.15E-106 transposed
Bma06g00295 Bma-Chr6:4274616 Bma08g01042 Bma-Chr8:49536459 4.05E-92 transposed
Bma07g00235 Bma-Chr7:2843037 Bma08g01042 Bma-Chr8:49536459 4.14E-97 transposed
Bma07g00973 Bma-Chr7:37565345 Bma08g01042 Bma-Chr8:49536459 4.33E-96 transposed
Bma09g00092 Bma-Chr9:2440209 Bma08g01042 Bma-Chr8:49536459 3.39E-102 transposed
Bma15g00880 Bma-Chr15:29396588 Bma08g01042 Bma-Chr8:49536459 2.19E-111 transposed
Bma03g00209 Bma-Chr3:1581454 Bma08g01042 Bma-Chr8:49536459 1.40E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g01042 K00430 - qsu:112028558 461.455