Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g01047 ATGTCCTCTGACGACATGAATGCCCTCAACTCGCAGCTGCTATTCCAAGACGAAACTTTGCGCTTTAATTGCGCCACCCCTCAGCGCCGAGTTGGGGAACCCGGTCCCAAAACTCGAGAGCTAAGCGGTTTCCTAGATGATAAGCTCTTCTCAGTTGATCGTGCTCGCTTCTTCACTCCCCAGGGACAGGATTTCCGACGGACGATGTATGGTGACGCCCCGGAGAGAACAGAGAGTCGAAATTGGAATGGAAATGGTAGTACTGCGGCGGCCAGCGGCAAATCCTCCGACGAGGACGATGATGAAGAGGAGGACGAAGATGACGAAGTCGACGATGATGGCGTAGGTGATGTGGAGGGACTTGTTGCTGATCCTATTGGTCGTAAGAGCAATTGTAATGTTAACATAGACGCAAACAATCAAAGTGGTGGGAGTGGACTAACCGGCGGAAAGGAAATCGGGAACGGAAAACCAAAGCAACACTCTCTTTTTGTAGAAATGCGATTGACCCAAGATGGACTGGGGAAGGATGGTGCGGTTTGCCAGTCAGGAAATCACGCCAGAGCAAGTCCGACTGAGAACAACCAGCTTGGAAGACTTGGGAACTACTCCAATGCAGTAACTATTGGAGAGTCCGAGAATGACATGTATTATTCACAGTTTCTGCAGGTAGCTGTATCATCTTCTTCTGGGCTGAAGGATTTGGGCGTGGAAAATGGCTCTGGGTTTAGTAGGAGAAAGGATTTCTCCTTTAATGGTGATGCTGGGGAGTCTTTGAGAGCAATCCTTTCAGACCCTGTGACGGATGCTCTTATGGACGATGCAATGATATTACCTTGTGGGCATTCATTTGGAAGTGGCGGTATACAACACGTGACTAGAATTAAAGCTTGCTACTCATGTTCTGTGTCCGTGTCAGAAGATTCATTTGCTCCAAATCTCGCTCTTCGAGATGCTGTCCAGGCCTTCCGCCGAGAAGAAGAGTTACAGCTGTATCGTTCACACAAGAGGAGAAGGGAGAGATTTGACCAGGATAAAAATGGTTATGGTGATATAACTCTCATGGACCAACCTAGGGGAAGAGGTGTGCAGTTTCCGTTTTCAGTGACTGACCGAGTTATTATAAAGGGAAACAAGCGAACACCACAGCGTTTCGTCGGTCGAGAGGCTGTCGTGACAACACAATGCTTGAATGGATGGTATGTAGTGAAGACACTGGACAACGCAGAGAGTGTGAAACTTCAGTATCGCTCGCTAGCCAGGGTCGGAGACGATCCGCCTTCAAGGACGACACATCCAAGCAAGATCTCGCCAAACTGGCTTTAG 1326 48.87 MSSDDMNALNSQLLFQDETLRFNCATPQRRVGEPGPKTRELSGFLDDKLFSVDRARFFTPQGQDFRRTMYGDAPERTESRNWNGNGSTAAASGKSSDEDDDEEEDEDDEVDDDGVGDVEGLVADPIGRKSNCNVNIDANNQSGGSGLTGGKEIGNGKPKQHSLFVEMRLTQDGLGKDGAVCQSGNHARASPTENNQLGRLGNYSNAVTIGESENDMYYSQFLQVAVSSSSGLKDLGVENGSGFSRRKDFSFNGDAGESLRAILSDPVTDALMDDAMILPCGHSFGSGGIQHVTRIKACYSCSVSVSEDSFAPNLALRDAVQAFRREEELQLYRSHKRRRERFDQDKNGYGDITLMDQPRGRGVQFPFSVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLARVGDDPPSRTTHPSKISPNWL 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 49599815 49605995 - Bma028484.1 Bma08g01047 87874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g01047 441 MobiDBLite consensus disorder prediction 96 118 - -
Bma08g01047 441 MobiDBLite consensus disorder prediction 78 93 - -
Bma08g01047 441 MobiDBLite consensus disorder prediction 73 157 - -
Bma08g01047 441 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62 42 441 - -
Bma08g01047 441 MobiDBLite consensus disorder prediction 421 441 - -
Bma08g01047 441 ProSiteProfiles U-box domain profile. 258 330 IPR003613 GO:0004842|GO:0016567
Bma08g01047 441 MobiDBLite consensus disorder prediction 132 148 - -
Bma08g01047 441 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 42 441 - -
Bma08g01047 441 SUPERFAMILY RING/U-box 259 330 - -
Bma08g01047 441 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 330 IPR013083 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g01047 - - vvi:100262140 538.88