Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma08g01055 | ATGCGGAATCTGGGTGAGGTGCTCATCTTGTTACTATTGGCTCCGGTGTTCGCGCGCGGGCTGAATCCCCCTCTGAACGATGATGTCTTGGGACTCATAGTGTTCAAGGCCGACATTCAAGATCCGAAGGGGAATCTTGCCTCTTGGAATGAAGACGATGATTGTCCGTGTAACTGGGTCGGCGTGCAATGTAACCCGAGATCCAGGCGGGTCACTGAGCTCAACCTTTCCGGATTCTCCCTCTCCGGTCGTCTAGGCCGAGGCCTCGTTCAGCTACAGTTTCTGCGAAGGCTATCGCTCTCAGACAACAATCTCACCGGAAATGTAGGCCCTAACATTGCACGGATCGATAATCTCCGAGTGATCGATTTGGGGAACAACGGCTTTTCAGGGAGTTTACCAAACGATTTCTTCAAGCAATGTGGGTCTTTGAGAATGGTTTCTCTGGCCGGGAACAAATTTTCAGGGAAAATCCCAGACAGTTTAACCTCATGCGCTGGTCTCGCTGCACTTAACTTATCATCCAATCAGTTCTCTGGTTCATTACCTTCTGGAATTTGGTCCCTAACTGGACTTCGCTCGCTTGATTTGTCGGATAATCTATTAGAGGGTAACATTCAGAAGGAGGTCGAAGGCTTGAATAATTTGCGAGCTATTAACTTGAGTAAGAACCGATTTTCTGGTCAGATTCCCGATGGAATCGGAAATTGTTTGCTCTTCCGCTCCATAGACCTCAGTGAGAATTCGTTTTCCGGCAACCTTCCAGACACCCTCCGGCGACTTTCTCTGTGTCATAATTTAAAGTTGCAGAAGAACTCATTTGTTGGCAAAGTTCCTGACTGGATACAAGAAATGAAAAGTCTAGAGACGGTGGATCTTTCGGGAAACACATTTTCTGGTCAGGTTCCTGATTCAGTCGGAAATCTCCCCTCGCTCAAGGTGTTGAATTTTTCAAGTAATGGCTTTACTGGTAGTTTGCCGGCGTCTCTGATTGATTGCCAGAGCTTAATGGTCTTAGATTTCAGTCATAATTCTATCTCCGGTGATTTCTCTACCTGGATTTCCAAAATGGGCTCACAAAATCTCTTGCTTTCAGAGAGCAAGCAGAGCAGAAGCCCGACTAGTTGGATATCTACTGTATCTGAGAAATCACTTCCAAATCTTAAAATCTTGGACCTATCTCACAATGCTTTCTCTGGTCTAATGCCGCCTGACATTGAGATTTTTGACAACCTACAGCTCTTAAACTTGGCCGGAAATTCTCTCGCCGGCGATATCCCAAAATCCATAGGAGGTCTGACGGCCCTGGATACCCTTGATTTGAGTGGGAATCGGCTAAATGGAAGTATTCCAGAGGAAATTTGTGAAGCCCCGGCCTTGAAGGTGCTGAAACTAGAGAAAAACTCTCTTGCAGGATCAATTCCTTGTTCAATTGGAAACTGTTCTTCTCTAATACCTGCATCGATGGCTAACCTTACTGATCTTCAAAATGTGGACTTGTCTTTTAACCTCCTCAATGGAACTCTCCCTAAGCAGCTCTCTGATCTTCCCAACCTACTCTTGTTCAATATTTCGCACAACGACATCCATGGTGACCTGCCTGCCGGAGGATTTTTCAACACCATATCCCCTTCCTCTGTCTCCGGCAATCCATCCCTCTGTGGCTCTGTTGTTAAGAAATCTTGCCCTGCAGTTCTTCCCAAACCCATTGTTCTTAACCCCAACTCGTCCTCTGACTCCACTGCAACTACTCTCCCTTCGGGTTTTGCTCGCAAGAGAATCATCCTCAGCGTATCAACTCTCATCGCCATTGGAGCAGCTGCTTTGATTGTGATTGGCGTAATAGCAATCACTGTGCTTAATATCCGAGTTCGATCATCCATTTCTCGTTCTGCAGCAGCCCTCGCTTTTTCTGGCGGAGATGACTTTAGTAACTCCCCCAGCACTGACGCCAATTCCGGCAAGCTTGTCATGTTTTCTGGCGACCCGGACTTCAGTACCGGGGCTCATGCTTTGCTCAATAAAGATTGTGAGCTTGGGAGGGGTGGATTTGGGACGGTCTACAAGACCCTTCTTCGGGATGGGCATCCAGTTGCAATCAAGAAGCTCACTGTCTCCAGTCTCGTCAAGTCCCAAGAAGACTTCGAAAGGGAAGTTAAGAAGTTGGGGAAAGTCCAGCACCGGAATATCATCACCCTTCATGGTTATTACTGGACTCCATCGCTGCAGCTCCTCATCGCTGAATTTGTTGCAGGAGGAAGTTTGTATTCGCACCTCCATGAAGTAACGGATGGAAACTTCCTCTCGTGGAATGAGAGCATCGCGTACTTACACCAAGTGAACATAATCCACTACAATATCAAGGCAAGCAACGTCTTGATTGACAGCTCCGGCGAACCAAAGATCGGAGATTTCGGCCTGGCAAAGCTATTGCCGATGCTAGACCGGTACGTTTTGAGCAGCAAGATTCAGAGTGCACTTGGCTATATGGCACCTGAATTTGCCTGTAAAACGGTGAAAATAACGGAAAAATGCGATGTTTATGGGTTTGGGGTTTTGGTATTGGAAGTGGTCACCGGAAAAAGACCGGTCGAGTACATGGAAGATGATGTGGTTGTTCTTTGTGACATGGTGCGAGGAGCATTGGAGGAAGGCAAGGTGGAAGAATGCGTCGACCGGAGGCTCTTGGGGAACTTTCCGGCCGAGGAAGCACTTCCGGTCATGAAATTAGGCTTGATCTGCACTTCTCAAGTGCCGTCAAACCGGCCAGACATGGCTGAGGTAGTAAATATATTGGAGCTGATACGATGCCCGTCAGAAGGCAACGACGAATCAGGATGA | 2841 | 47.48 | MRNLGEVLILLLLAPVFARGLNPPLNDDVLGLIVFKADIQDPKGNLASWNEDDDCPCNWVGVQCNPRSRRVTELNLSGFSLSGRLGRGLVQLQFLRRLSLSDNNLTGNVGPNIARIDNLRVIDLGNNGFSGSLPNDFFKQCGSLRMVSLAGNKFSGKIPDSLTSCAGLAALNLSSNQFSGSLPSGIWSLTGLRSLDLSDNLLEGNIQKEVEGLNNLRAINLSKNRFSGQIPDGIGNCLLFRSIDLSENSFSGNLPDTLRRLSLCHNLKLQKNSFVGKVPDWIQEMKSLETVDLSGNTFSGQVPDSVGNLPSLKVLNFSSNGFTGSLPASLIDCQSLMVLDFSHNSISGDFSTWISKMGSQNLLLSESKQSRSPTSWISTVSEKSLPNLKILDLSHNAFSGLMPPDIEIFDNLQLLNLAGNSLAGDIPKSIGGLTALDTLDLSGNRLNGSIPEEICEAPALKVLKLEKNSLAGSIPCSIGNCSSLIPASMANLTDLQNVDLSFNLLNGTLPKQLSDLPNLLLFNISHNDIHGDLPAGGFFNTISPSSVSGNPSLCGSVVKKSCPAVLPKPIVLNPNSSSDSTATTLPSGFARKRIILSVSTLIAIGAAALIVIGVIAITVLNIRVRSSISRSAAALAFSGGDDFSNSPSTDANSGKLVMFSGDPDFSTGAHALLNKDCELGRGGFGTVYKTLLRDGHPVAIKKLTVSSLVKSQEDFEREVKKLGKVQHRNIITLHGYYWTPSLQLLIAEFVAGGSLYSHLHEVTDGNFLSWNESIAYLHQVNIIHYNIKASNVLIDSSGEPKIGDFGLAKLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEECVDRRLLGNFPAEEALPVMKLGLICTSQVPSNRPDMAEVVNILELIRCPSEGNDESG | 946 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 49657352 | 49662319 | + | Bma028494.1 | Bma08g01055 | 87882 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma08g01055 | 946 | SUPERFAMILY | L domain-like | 41 | 359 | - | - | |
Bma08g01055 | 946 | Gene3D | Ribonuclease Inhibitor | 362 | 483 | IPR032675 | - | |
Bma08g01055 | 946 | Gene3D | Ribonuclease Inhibitor | 484 | 565 | IPR032675 | - | |
Bma08g01055 | 946 | SUPERFAMILY | Protein kinase-like (PK-like) | 677 | 930 | IPR011009 | - | |
Bma08g01055 | 946 | ProSiteProfiles | Protein kinase domain profile. | 673 | 935 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma08g01055 | 946 | Pfam | Protein kinase domain | 676 | 871 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma08g01055 | 946 | Gene3D | Phosphorylase Kinase; domain 1 | 667 | 749 | - | - | |
Bma08g01055 | 946 | Pfam | Leucine rich repeat N-terminal domain | 26 | 65 | IPR013210 | - | |
Bma08g01055 | 946 | Pfam | Leucine rich repeat | 411 | 470 | IPR001611 | GO:0005515 | |
Bma08g01055 | 946 | Pfam | Leucine rich repeat | 118 | 178 | IPR001611 | GO:0005515 | |
Bma08g01055 | 946 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 | 5 | 943 | - | - | |
Bma08g01055 | 946 | SMART | LRR_sd22_2 | 492 | 518 | - | - | |
Bma08g01055 | 946 | SMART | LRR_sd22_2 | 92 | 121 | - | - | |
Bma08g01055 | 946 | SMART | LRR_sd22_2 | 189 | 215 | - | - | |
Bma08g01055 | 946 | SMART | LRR_sd22_2 | 433 | 456 | - | - | |
Bma08g01055 | 946 | SMART | LRR_sd22_2 | 385 | 414 | - | - | |
Bma08g01055 | 946 | PRINTS | Leucine-rich repeat signature | 433 | 446 | - | - | |
Bma08g01055 | 946 | PRINTS | Leucine-rich repeat signature | 388 | 401 | - | - | |
Bma08g01055 | 946 | Gene3D | Ribonuclease Inhibitor | 286 | 361 | IPR032675 | - | |
Bma08g01055 | 946 | Gene3D | Transferase(Phosphotransferase) domain 1 | 750 | 944 | - | - | |
Bma08g01055 | 946 | Gene3D | Ribonuclease Inhibitor | 26 | 183 | IPR032675 | - | |
Bma08g01055 | 946 | Gene3D | Ribonuclease Inhibitor | 184 | 281 | IPR032675 | - | |
Bma08g01055 | 946 | SUPERFAMILY | RNI-like | 266 | 538 | - | - | |
Bma08g01055 | 946 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 5 | 943 | - | - | |
Bma08g01055 | 946 | ProSitePatterns | Protein kinases ATP-binding region signature. | 679 | 702 | IPR017441 | GO:0005524 | |
Bma08g01055 | 946 | SMART | LRR_typ_2 | 385 | 411 | IPR003591 | - | |
Bma08g01055 | 946 | SMART | LRR_typ_2 | 433 | 457 | IPR003591 | - | |
Bma08g01055 | 946 | SMART | LRR_typ_2 | 309 | 333 | IPR003591 | - | |
Bma08g01055 | 946 | SMART | LRR_typ_2 | 492 | 516 | IPR003591 | - | |
Bma08g01055 | 946 | SMART | LRR_typ_2 | 116 | 140 | IPR003591 | - | |
Bma08g01055 | 946 | SMART | LRR_typ_2 | 189 | 212 | IPR003591 | - | |
Bma08g01055 | 946 | SMART | LRR_typ_2 | 213 | 237 | IPR003591 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g00995 | Bma-Chr4:16141302 | Bma08g01055 | Bma-Chr8:49657352 | 0 | dispersed | |
Bma06g01410 | Bma-Chr6:50856720 | Bma08g01055 | Bma-Chr8:49657352 | 4.71E-19 | dispersed | |
Bma08g01055 | Bma-Chr8:49657352 | Bma10g01166 | Bma-Chr10:40786128 | 2.32E-122 | dispersed | |
Bma10g00358 | Bma-Chr10:3355467 | Bma08g01055 | Bma-Chr8:49657352 | 0 | transposed | |
Bma03g00194 | Bma-Chr3:1487957 | Bma08g01055 | Bma-Chr8:49657352 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66678 | PF00069 | Pkinase | 4.90E-39 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma08g01055 | - | - | mcha:111006338 | 1353.19 |