Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g01100 ATGGCCGGAGTTGTGTCTGTGTTTCCGAACAAGAAAAGACATCTCCATACAACAAGATCATGGGATTTCATGAAGTTTTCGCAGCGTGTTCGTCGAACGGCCGTAGAAAGCAACATCATCGTCGGAGTTCTAGATACCGGAATTTGGCCGGAATCTCCGAGCTTTAAAGATTTTGGATTTGGTCCGCCGCCAAGGAAATGGAAAGGCTCTTGTCGTGCAGCAAATTTTACTTGTAACAAGAAACTTGTCGGAGCAAAATTTTACCGGAGCGACCGACGGTTCCCAAAGGACGACAGTGTCAGTCCTAGAGACGTTAACGGTCACGGAACTCACACGGCATCGACGGTGGCCGGGGGTTTGGTTAACGGGGCAAGTCTCTACGGTCTCGGGCAAGGAATAGCGAGAGGAGGCGTCCCGTCCGCTCGAATCGCCGTCTACAAAGTTTGCTGGACCGATGGCTGCTACGACGCCGATATTCTGCATGCGTTCGACGATGCAATCGCCGACGGAGTGGACATAATCTCTCTCTCCGTCGGTTGGTTCAGACCACTGACCTATTTCAACGACGCAATCGCCATTGGCGCTTTTCATGCAATGATGAAAGGAATAATGACTTCTAATTCCGCCGGAAACGATGGCCCTGGTTTAAAAACGATAAAGAACTTCTCCCCGTGGTCGCTTTCCGTGGCAGCCAGCACCATTGATCGGAAGTTTTTCACCGGAGTACAGCTTGGTAACAAGAACATCTATCAGGGAATATCAAAAAACACATTCAATCTCAACGGGAAAATGTTTCCTCTGATTTACGCCGGAGATGCACCTAATACTACCGGAGGCTTCACCTCCTCGACTTCCAGATACTGCGATGAAAACTCAGTGGATTTAAGGGTAGTGAGAGGGAAGATTGTTCTGTGCGATAGCTTCCTCTCTCCTGTATCCACGTCTCACTTGATCAACAAAGCTGCCGGAATTATAATGCAAGACTCTGGTTCTAAAGATACCTCTTATACATTCCCATTGCCTGCTTCATACTTGGGTCCTCAAGCTGGTCAAAGTATTCGCCTCTATATGAATCAAGCAAGGAAGTCATTTAGGTCAGCATCAGCAACTATATTCAAGACCAGGCCAGGGAATGATAGAATCGCTCCATACGTAGCTTCTTTCTCGTCAAGAGGACCAAATCCAGTTACTCTAGACATTATGAAGCCTGATATATCTGCTCCGGGAGTTGATATTCTCGCAGCCTGGTCTCCGGTGAGGTCGCTCACCGGAGTAGAAGGAGACAAACGATTCGTTCACTTTAATATAATCTCCGGCACCTCAATGGCTTGTCCCCACGTCACTGCAGTGGCTTCTTATGTGAAGTCGTTTCACCCGTCGTGGTCTCCGGCAGCGCTCAAATCAGCTCTTATGACAACCGCTGATCCGATGAGTCCAAAAGTGAACCCCGAGGGGGAGTTCGCGTACGGGTCAGGTCATGTAAACCCGGTCAGAGCTGTGCATCCGGGATTGGTCTACGACGCCGGTAGAGCAGACTACGTAAGGTTCTTGTGCGGCCAAGGATATAACTCAGCGCTGCTACAGACGGTGACCGGAGACAACAGCACATGTTCTCCGACCAACAGAGGAACAGTATGGGACCTAAACTACCCTTCGTTTGCTCTATCAACCTCCACTTTCCAATTACCCACCGCTCCATTAGAGCTGAAAATCACAGTTTATCCTCCAGTTCTCTCCTTCTCTCGCATTGGACAGAAGCTGTCTTTTGCAGTCACCATTAAAGGAGCTATAAAGAGAAGCATAGTTTCAGCTTCGTTAGCGTGGGACTGA 1830 48.96 MAGVVSVFPNKKRHLHTTRSWDFMKFSQRVRRTAVESNIIVGVLDTGIWPESPSFKDFGFGPPPRKWKGSCRAANFTCNKKLVGAKFYRSDRRFPKDDSVSPRDVNGHGTHTASTVAGGLVNGASLYGLGQGIARGGVPSARIAVYKVCWTDGCYDADILHAFDDAIADGVDIISLSVGWFRPLTYFNDAIAIGAFHAMMKGIMTSNSAGNDGPGLKTIKNFSPWSLSVAASTIDRKFFTGVQLGNKNIYQGISKNTFNLNGKMFPLIYAGDAPNTTGGFTSSTSRYCDENSVDLRVVRGKIVLCDSFLSPVSTSHLINKAAGIIMQDSGSKDTSYTFPLPASYLGPQAGQSIRLYMNQARKSFRSASATIFKTRPGNDRIAPYVASFSSRGPNPVTLDIMKPDISAPGVDILAAWSPVRSLTGVEGDKRFVHFNIISGTSMACPHVTAVASYVKSFHPSWSPAALKSALMTTADPMSPKVNPEGEFAYGSGHVNPVRAVHPGLVYDAGRADYVRFLCGQGYNSALLQTVTGDNSTCSPTNRGTVWDLNYPSFALSTSTFQLPTAPLELKITVYPPVLSFSRIGQKLSFAVTIKGAIKRSIVSASLAWD 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 49995509 49998185 - Bma028542.1 Bma08g01100 87927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g01100 609 ProSiteProfiles Serine proteases, subtilase domain profile. 20 500 - -
Bma08g01100 609 CDD PA_subtilisin_like 242 371 - -
Bma08g01100 609 PRINTS Subtilisin serine protease family (S8) signature 104 117 IPR015500 -
Bma08g01100 609 PRINTS Subtilisin serine protease family (S8) signature 438 454 IPR015500 -
Bma08g01100 609 PRINTS Subtilisin serine protease family (S8) signature 36 55 IPR015500 -
Bma08g01100 609 CDD Peptidases_S8_3 14 475 IPR034197 -
Bma08g01100 609 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 609 IPR045051 -
Bma08g01100 609 Gene3D - 235 378 - -
Bma08g01100 609 Gene3D - 562 609 - -
Bma08g01100 609 Gene3D - 517 561 - -
Bma08g01100 609 ProSitePatterns Serine proteases, subtilase family, serine active site. 439 449 IPR023828 -
Bma08g01100 609 Pfam Subtilase family 37 490 IPR000209 GO:0006508|GO:0008236
Bma08g01100 609 Gene3D Peptidase S8/S53 domain 38 513 IPR036852 GO:0004252|GO:0006508
Bma08g01100 609 PANTHER PUTATIVE-RELATED 2 609 - -
Bma08g01100 609 SUPERFAMILY Subtilisin-like 15 504 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01956 Bma-Chr1:72370129 Bma08g01100 Bma-Chr8:49995509 0 dispersed
Bma08g01100 Bma-Chr8:49995509 Bma10g00670 Bma-Chr10:9680849 5.07E-155 dispersed
Bma08g01100 Bma-Chr8:49995509 Bma10g00711 Bma-Chr10:10836447 6.69E-157 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g01100 - - bhj:120082098 820.076