Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma08g01152 | ATGGCCAAGGCTACGGAAGTTTCTGCGCAAGGATCGTTCTCGGCGAAGGACTACCACGACCCACCACCGGCGCCGCTCGTTGACGCGGAGGAGCTGTTGCAGTGGTCTTTCTACAGGGCGTTGATAGCGGAGTTTATAGCTACTTTGCTTTTTCTCTACGTCACTATCTTGACTGTGATTGGTTATACCAGCCAAACTACGTCCGACCCATGCGGCGGCGTAGGGGTTCTAGGTATCGCATGGGCCTTCGGCGGCATGATCTTCGTTCTCGTCTACTGCACTGCTGGAATTTCAGGTTCGCTGTCTCTCAACTTTCTCACCCTCCGAACTCATTGTCTTGCAGGGGGTCACATAAACCCGGCGGTGACCTTGGGGTTGTTCTTGGCTCGAAAGGTGTCGCTGGTCCGAGCCGTGATGTACATGGTGGCTCAGTGTTTAGGAGCCATATGCGGAGTGGCGCTCGTTAAGGCGTTCCAAAAGGCTCATTACAGTAATCATGGAGGTGGAGCCAACCATCTCGCCGATGGCTACAGCACAGGCGTCGGTCTCGGTGCAGAGATCATAGGCACCTTCGTTTTGGTCTACACAGTCTTCTCGGCCACTGATCCGAAGAGAAATGCCAGAGACTCCCACGTACCGGTTCTGGCTCCGCTTCCGATCGGATTTGCTGTGTTCATGGTTCACTTGGCCACAATCCCGATCACCGGCACCGGAATCAACCCAGCTAGAAGTCTTGGAGCTGCTGTCGTCTACAATCAGAAAAACACGTGGGATGAGCAATGGATTTTTTGGGTCGGACCATTCGTCGGAGCAGCCATTGCAGCGTTCTATCATCAGTTCATACTGAGGGCGGCGGCAGCTAAAGCTCTTGGATCTTTCAGGAGCAATTCCCATGTCTGA | 900 | 53.89 | MAKATEVSAQGSFSAKDYHDPPPAPLVDAEELLQWSFYRALIAEFIATLLFLYVTILTVIGYTSQTTSDPCGGVGVLGIAWAFGGMIFVLVYCTAGISGSLSLNFLTLRTHCLAGGHINPAVTLGLFLARKVSLVRAVMYMVAQCLGAICGVALVKAFQKAHYSNHGGGANHLADGYSTGVGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNQKNTWDEQWIFWVGPFVGAAIAAFYHQFILRAAAAKALGSFRSNSHV | 299 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 50551770 | 50553448 | - | Bma028597.2 | Bma08g01152 | 87979 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma08g01152 | 299 | TIGRFAM | MIP: MIP family channel proteins | 43 | 278 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma08g01152 | 299 | Gene3D | Glycerol uptake facilitator protein. | 24 | 299 | IPR023271 | - | |
Bma08g01152 | 299 | PANTHER | AQUAPORIN PIP2-1 | 108 | 296 | - | - | |
Bma08g01152 | 299 | CDD | MIP | 39 | 281 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma08g01152 | 299 | Pfam | Major intrinsic protein | 32 | 278 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma08g01152 | 299 | ProSitePatterns | MIP family signature. | 117 | 125 | IPR022357 | - | |
Bma08g01152 | 299 | PRINTS | Major intrinsic protein family signature | 185 | 203 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma08g01152 | 299 | PRINTS | Major intrinsic protein family signature | 261 | 281 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma08g01152 | 299 | PRINTS | Major intrinsic protein family signature | 39 | 58 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma08g01152 | 299 | PRINTS | Major intrinsic protein family signature | 99 | 123 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma08g01152 | 299 | PRINTS | Major intrinsic protein family signature | 136 | 155 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma08g01152 | 299 | PRINTS | Major intrinsic protein family signature | 221 | 243 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma08g01152 | 299 | PANTHER | AQUAPORIN PIP2-1 | 7 | 100 | - | - | |
Bma08g01152 | 299 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 108 | 296 | IPR034294 | - | |
Bma08g01152 | 299 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 7 | 100 | IPR034294 | - | |
Bma08g01152 | 299 | SUPERFAMILY | Aquaporin-like | 31 | 283 | IPR023271 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g01921 | Bma-Chr1:70932899 | Bma08g01152 | Bma-Chr8:50551770 | 9.38E-116 | dispersed | |
Bma03g00613 | Bma-Chr3:5030967 | Bma08g01152 | Bma-Chr8:50551770 | 9.22E-142 | dispersed | |
Bma04g01411 | Bma-Chr4:48871349 | Bma08g01152 | Bma-Chr8:50551770 | 5.02E-12 | dispersed | |
Bma05g00373 | Bma-Chr5:11918162 | Bma08g01152 | Bma-Chr8:50551770 | 3.98E-145 | dispersed | |
Bma05g00835 | Bma-Chr5:45726737 | Bma08g01152 | Bma-Chr8:50551770 | 1.14E-129 | dispersed | |
Bma08g00749 | Bma-Chr8:43945857 | Bma08g01152 | Bma-Chr8:50551770 | 4.35E-102 | dispersed | |
Bma08g01152 | Bma-Chr8:50551770 | Bma12g00064 | Bma-Chr12:1219290 | 1.24E-127 | dispersed | |
Bma07g00147 | Bma-Chr7:2120793 | Bma08g01152 | Bma-Chr8:50551770 | 3.67E-154 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma08g01152 | K09872 | - | gmx:100815583 | 490.73 |