Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g01169 ATGGATGGTCTTCGGAAACCGCGGCCCGGCAGAACGACGTCGCTTCGAGACGCCTCTGAGTCGGAGAAGATGGAGGGCCCTGGCTCATGGGACGCCATTGAATGGACTAAGATCGAGCCGGTTTCTCGGTTGGTCGCGAACGTGAGTGTAGATTGCCTGCTTGAAGCTGAACAAGTTGTGGCTGAGGGTAATGGTGTTGTCCTTGTAAATACCGGTGAGGCTGGTACTTTGTATGTGACCAACTATCGTCTTCTTTTTCTTAATGGAGGAACTGGAAAAACTATTTCCTTGGGCACTATACCACTGGCGACAATTGAGAAGTTTAGCAAGATGGTGTTGAAGGGTCAATCAGCCCCACGCCAATTGGAAAAGATTCCAGCTCGAAGGCTTCTGCAGGTCATAGGTAAAGACATGAGAGTGGTAGTCTTTGGTTTCCGTCCTAAAACAAAACAGCGGCGACGGATATATGATGCATTGCTTGGATGTACAAAGCCAGCAAGACTATGGGATCTGTATGCTTTTATATCAGGTCCTTCTAGATATAGCAACACTAGCCCAAAGGTTCGATTACTTAATGAATATTATCGGCTACTTGGAAAAAGCTTCCGCCGTGCATCATTGAGTATGATTGAAGATGGATCATTTACATTGTCCAATGAACTATGGAGAGTAACCGATATAAATTACAATTATACTATGTGTCAGAGTTATCCATTTGCATTGATTGTTCCAAAATCTATTACTGATGATGAAGTGCTCCAGGCTTCCAACTTTCGTGCTAGAGGCCGGTTACCTGTAGTTTCATGGTGCCACCCTGAAAGTGGAGCTGTTCTGGCCCGTTCATCACAACCCTTGGTTGGTTTCATGATGAATATGAGGAGCAATACAGATGAAAAGCTTGTTGCTGCACTTTGTTCTCAATTTGCTGGTGCTGAGGAGCCACGTAGAAAGCTGTATATTGCCGATGCAAGACCTAGAAAAAATGCATTAGCGAATGGGGCAATGGGAGGTGGGTCAGAATCATCTTCAAATTATTCTCAATCTGAGATAGTATTCTTCGGGGTTGACAATATACATGCAATGAGAGAGAGTCTCGCTAGGCTTAGAGACTACTTAGATACTCATGGTGCCACTTCATCTGATGGAATGTCATCATTCTTGAGACATGGTGGATGGACTTGGGGTGGAGGGAATCTGAGTAGTATGTCTGCTTCTGTATCTACTCTTGGAGACAGTGGTTGGTTAATACACGTCCAAACTGTCTTGGCTGGTTCAGCATGGATTGCTGCACGCGTTGAATTGGAATCTGCATCAGTTCTTGTTCATTGCAGTGATGGTTGGGACAGAACAACTCAACTGGTATCACTTGCTAGTTTGTTGCTTGATCCATACTATCGGACATTCACAGGGTTTCAGGCTCTGATCGAGAAGGATTGGCTGGCATTTGGCCATCCTTGTTCAGATCGCATGGGTGTACCATCTATGTTTGGAAGTGGGAACATGCCTTCTGAACTATCTAGGCAGTCTTCTACGGGGAGTTTCCCCTCATCTCCTCTGCGGCAGTCATCAGGATCATTCACATCTCAAGCTCCTGTTCCTCCTCAGGGGCACTCATCAAACAATTATTCTCCAATATTTTTGCAGTGGATTGATTGTGTATCGCAACTTCTGCGGATCTATCCATTTGCATTTGAGTTTTCCTCGGCTTTTTTGGTGGATTTGTTAGATTGTTTTCTTTCTTGTCGCTTTGGGAACTTTCTGTGCAATAGTGAGAAGGAGAGGCAGCAATGTGGTGTTTCTGAAGTTTGTGGGTGCTTATGGGCATATTTGGCTGACTTGCGTGCTTCAGAGGGTAGTTCTCATTTTCACTATAACCTCTTCTATGATCCGTCAAAATTCAATGCTCCACTGCTGCCTCCAGCAGCAGCCTTAGCTCCGACTCTGTGGCCTCATTTCCATCTTCGTTTTTCTTGTCCATCTGAGGCTCAATCTGGGGAAATTGAAATGCAATTTAGGAAAATGGCTAATCAATTCTCTGGACTTCAAAAGGAGAAGGAAATGGCAGAAAGAAAAGCTAAAGAGATAACATCTCTCATGAAGTCATTAAATGTGGAATTGCGAAAGGAGAGACAACTTGCCAGCTCAGCGATGAACTTAGCAAAAAGAGCGAGCAAGGAAAGCGAGTCGATAAAGCGAGCAATACAATCTCTTGGTTGTAAAGTTAATTTCTCCAGCAATAGCGATTGTGTAGTAGATGTAGAAGATAATCCAATGGAGGCTTCTCAGAGATTTAAATATTTATCAAAAAGAGAATCAGATGGGAAGGCGCAGGAAAATGATCTCTCTGTATCTGTAACAGTCATTGGAGACGAAGAGGCTAACAGTCCCTTCGGAAGTATTTGTGAAACGCTCTGCCCATTACGGACAAGAGAAGGAGGCTGCAGATGGCCAGACGCAGGTTGTGCGCAGATGGGTAGCCAATTTGTTGGACTGAAAGCAAACTTCGATGCATTTGATCGTCTATCGCTACAAGAAAGTTATTTTAAGTCTGATTGA 2556 44.29 MDGLRKPRPGRTTSLRDASESEKMEGPGSWDAIEWTKIEPVSRLVANVSVDCLLEAEQVVAEGNGVVLVNTGEAGTLYVTNYRLLFLNGGTGKTISLGTIPLATIEKFSKMVLKGQSAPRQLEKIPARRLLQVIGKDMRVVVFGFRPKTKQRRRIYDALLGCTKPARLWDLYAFISGPSRYSNTSPKVRLLNEYYRLLGKSFRRASLSMIEDGSFTLSNELWRVTDINYNYTMCQSYPFALIVPKSITDDEVLQASNFRARGRLPVVSWCHPESGAVLARSSQPLVGFMMNMRSNTDEKLVAALCSQFAGAEEPRRKLYIADARPRKNALANGAMGGGSESSSNYSQSEIVFFGVDNIHAMRESLARLRDYLDTHGATSSDGMSSFLRHGGWTWGGGNLSSMSASVSTLGDSGWLIHVQTVLAGSAWIAARVELESASVLVHCSDGWDRTTQLVSLASLLLDPYYRTFTGFQALIEKDWLAFGHPCSDRMGVPSMFGSGNMPSELSRQSSTGSFPSSPLRQSSGSFTSQAPVPPQGHSSNNYSPIFLQWIDCVSQLLRIYPFAFEFSSAFLVDLLDCFLSCRFGNFLCNSEKERQQCGVSEVCGCLWAYLADLRASEGSSHFHYNLFYDPSKFNAPLLPPAAALAPTLWPHFHLRFSCPSEAQSGEIEMQFRKMANQFSGLQKEKEMAERKAKEITSLMKSLNVELRKERQLASSAMNLAKRASKESESIKRAIQSLGCKVNFSSNSDCVVDVEDNPMEASQRFKYLSKRESDGKAQENDLSVSVTVIGDEEANSPFGSICETLCPLRTREGGCRWPDAGCAQMGSQFVGLKANFDAFDRLSLQESYFKSD 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 50654066 50669041 + Bma028613.1 Bma08g01169 87996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g01169 851 Coils Coil 671 705 - -
Bma08g01169 851 MobiDBLite consensus disorder prediction 501 536 - -
Bma08g01169 851 CDD PTP-MTM-like 262 555 - -
Bma08g01169 851 Pfam Myotubularin-like phosphatase domain 188 595 IPR010569 -
Bma08g01169 851 PANTHER MYOTUBULARIN-RELATED 20 850 IPR030564 -
Bma08g01169 851 SUPERFAMILY PH domain-like 52 175 - -
Bma08g01169 851 MobiDBLite consensus disorder prediction 1 28 - -
Bma08g01169 851 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 216 656 IPR029021 -
Bma08g01169 851 SMART gram2001c 42 112 IPR004182 -
Bma08g01169 851 MobiDBLite consensus disorder prediction 1 24 - -
Bma08g01169 851 ProSiteProfiles Myotubularin phosphatase domain. 199 653 IPR010569 -
Bma08g01169 851 ProSitePatterns Tyrosine specific protein phosphatases active site. 441 451 IPR016130 GO:0016311|GO:0016791
Bma08g01169 851 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 20 850 - -
Bma08g01169 851 Gene3D - 64 162 IPR011993 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g01169 K18081 - jre:109009366 1282.7