Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g01192 ATGGGGAAGAAGAAGAAGAAGGTTTCGTCCAAGATGTGGTGCTATTATTGCGATCGGGAATTCGACGACGAGAAGATACTGGTGCAGCATCAAAAGGCCAAACACTTCAAGTGCCATGTCTGTCATAAGAAGCTCTCCACCGCCGGTGGTATGGTCATCCATGTTCTCCAGGTCCACAAGGAGACCGTCCCCAAGGTTCCCAATGCAAAGCCAGGAAGGGAATCAACTGACATTGAAATATATGGGATGCAAGGAATTCCACCAGAAATCTTGGCGGCACACTATGGAGATGAAGAGGAAGAACCTCCATCAAAATGGGCAAAATTGGATAGTCCATCCTTTCAGCATTTAAGAGGTGCGGTTCCCAGAGCATTAGGCATTTCATATCCTCCTCAACCAGCAATTTACAGGCCCTCTGTGCCAGCACTGCCTAATGCTTGGCCTGGTCAACCTCGACCTCAACCTTGGCTCCCGCAGAATCCTAATGTTTCAATCCCATCTCCTGGAACTCTGGGCTTTCCACAGCAGCCACTGTTTCCTGTGCAGAATATGAGACCGCCACTTCCATCAACGATGACTCCTGCACTTCAGCCAGCACTAATAACTCCTCCTGGATTGCCCGTATCGTCAACCCTTGGTTCTGTGTCACAACCCTTGTTCCCTGTGGGTAGTAGTAGCACTTTGCCTTCTCCAAATTCACTTTTCCCTACTTCCATTATTTCAACAACCATTCCTTCAATATCTCCGGTAGAAATAAGAGGCTCCATTGGCACACATCTTGGCAGTAGTAATTCTTCTACAAATAACGATCAAAGCCCTAGCATTCCAGGGGGGCCGTTAACTAATTCGCATTCTTATGCCTCTGGTCCCAACACTGGTGGCCCTTCTATTGGACCTCCCCCTGTAATTGCGAACAAAGCTCCTACTACCCAGCCAAAGACGAATGAAGTCTATTTAGTGTGGGATGATGAGGCAATGTCTATGGAGGAAAGAAGAATGTCCTTGACAAAGTTTCAGGTGCATGATGAATCTAGCCAGGTAAGTTTTAAAATCACTCTAGTATCTGAAGTAGATTAA 1077 46.89 MGKKKKKVSSKMWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHKETVPKVPNAKPGRESTDIEIYGMQGIPPEILAAHYGDEEEEPPSKWAKLDSPSFQHLRGAVPRALGISYPPQPAIYRPSVPALPNAWPGQPRPQPWLPQNPNVSIPSPGTLGFPQQPLFPVQNMRPPLPSTMTPALQPALITPPGLPVSSTLGSVSQPLFPVGSSSTLPSPNSLFPTSIISTTIPSISPVEIRGSIGTHLGSSNSSTNNDQSPSIPGGPLTNSHSYASGPNTGGPSIGPPPVIANKAPTTQPKTNEVYLVWDDEAMSMEERRMSLTKFQVHDESSQVSFKITLVSEVD 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 50833006 50835639 + Bma028632.2 Bma08g01192 88019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g01192 358 PANTHER ZINC FINGER PROTEIN 207 1 348 - -
Bma08g01192 358 Gene3D Classic Zinc Finger 1 65 - -
Bma08g01192 358 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Bma08g01192 358 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Bma08g01192 358 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Bma08g01192 358 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 348 - -
Bma08g01192 358 SMART c2h2final6 36 59 IPR013087 -
Bma08g01192 358 SMART c2h2final6 12 35 IPR013087 -
Bma08g01192 358 MobiDBLite consensus disorder prediction 255 310 - -
Bma08g01192 358 ProSiteProfiles Zinc finger C2H2 type domain profile. 36 64 IPR013087 -
Bma08g01192 358 MobiDBLite consensus disorder prediction 257 292 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57812 None None None None Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g01192 - - qlo:115968333 518.85