Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g01208 TACGAGAAGGTCGAAAAGATTGGTGAAGGAACCTATGGTGTCGTTTACAAGGCTCGTGACCGCGTCACTAATGAGACAATTGCTCTGAAGAAGATTCGCTTGGAGCAGGAAGATGAGGGAGTTCCAAGCACAGCAATACGAGAAATTTCACTCTTGAAAGAAATGCAGCATGGAAACATTGTTAGGTTACAGGATGTAGTGCACAGTGAAAAGCGTTTATATCTTGTTTTTGAGTACCTGGACCTGGATCTAAAAAAGCACATGGATTCTTCTCCAGAATTTGCCAAGGATCTGCGTCAAATTAAAATGTTCCTTTACCAAATTCTTCGTGGTATTGCTTACTGTCATTCTCATAGAGTTCTTCATAGAGATCTGAAACCTCAAAACTTGCTGATAGACAGACGTACCAACGCACTGAAGCTTGCTGATTTTGGACTGGCTAGAGCATTTGGTATTCCTGTTAGGACATTTACACATGAGGTTGTGACTCTTTGGTACAGAGCTCCAGAAATATTGCTTGGATCCCGCCACTACTCCACCCCTGTTGATGTGTGGTCTGTTGGTTGTATATTTGCTGAAATGCTAAATCAAAAGCCATTATTCCCTGGGGATTCCGAGATTGATGAATTGTTTAAGATATTCAGGGTGTTGGGCACTCCAAATGACGAAACTTGGCCTGGAGTGACTTCGTTGCCCGATTTTAAATCTGCCTTCCCGAAGTGGCTTACTCAGGACATGGCTTCTGTTGTTCCAACTCTTGAATCAACTGGTGTTGATCTTCTTTCTAAAATGCTCTGCTTGGATCCCACCAAACGAATCACAGCCAGGAGCGCTCTCGAGCATGAATACTTTAAAGACGTCACGTTTGTGCCCTGA 876 43.26 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDLRQIKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMLNQKPLFPGDSEIDELFKIFRVLGTPNDETWPGVTSLPDFKSAFPKWLTQDMASVVPTLESTGVDLLSKMLCLDPTKRITARSALEHEYFKDVTFVP 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 51074399 51078057 + Bma028651.1 Bma08g01208 88035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g01208 291 PANTHER CELL DIVISION PROTEIN KINASE 1 288 - -
Bma08g01208 291 SUPERFAMILY Protein kinase-like (PK-like) 1 288 IPR011009 -
Bma08g01208 291 CDD STKc_CDK1_CdkB_like 1 284 - -
Bma08g01208 291 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Bma08g01208 291 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g01208 291 SMART serkin_6 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g01208 291 Pfam Protein kinase domain 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g01208 291 Gene3D Transferase(Phosphotransferase) domain 1 83 289 - -
Bma08g01208 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Bma08g01208 291 PANTHER CYCLIN-DEPENDENT KINASE A-2 1 288 - -
Bma08g01208 291 ProSitePatterns Protein kinases ATP-binding region signature. 7 30 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g01208 Bma-Chr8:51074399 Bma11g00324 Bma-Chr11:3049421 1.84E-85 dispersed
Bma01g02422 Bma-Chr1:81851899 Bma08g01208 Bma-Chr8:51074399 1.80E-118 transposed
Bma12g00321 Bma-Chr12:4829941 Bma08g01208 Bma-Chr8:51074399 5.53E-110 transposed
Bma15g00419 Bma-Chr15:4536492 Bma08g01208 Bma-Chr8:51074399 5.77E-120 transposed
Bma15g00761 Bma-Chr15:15730603 Bma08g01208 Bma-Chr8:51074399 2.12E-62 transposed
Bma03g00379 Bma-Chr3:2882032 Bma08g01208 Bma-Chr8:51074399 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66683 PF00069 Pkinase 2.10E-81 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g01208 K02206 - mnt:21397004 564.303