Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00008 ATGGGTAGGCTCAGTCTTCTTCTCGTTCTTTCCCTTTCTCTGAATTTCTTCCTCTTCATTTCTCCTTCCTCGGCTCAACTCAGGGTGGGTTTTTACTCCAACATCTGTCCCGACGTCGAAAAATTGGTTAGAAACGTAGTCACCACGAAATTCCAGCAGACTTTCGTCACTGTTCCGGCTACCCTTCGTCTCTTCTTCCACGACTGCTTCGTTCAGGGGTGCGATGCTTCCGTAGTAATTGCTTCGACTGGAGGGAATAAGGCCGAAAAAGACCACGAAGACAACCTGTCGTTGGCCGGGGATGGGTTTGACACCGTCGTTAAAGCCAAAGCAGCCGTTGACGCGGTGCCGCGTTGTAAAAACAGAGTCTCCTGCGCGGATATTCTGGCTTTGGCCGCCCGAGACGTCGTCTTTCTGGCGGGTGGACCTTCGTATCCAGTGGAGCTAGGAAGATTGGACGGGCTTGTTTCGAGAGCTTCGGACGTGAACGGGAAGCTTCCCCAGCCAACCTTCACTCTGGACCAACTGAACTCTCTCTTCGCCGGTCATGGTCTGACCCAAGAAGACATGATCGCCCTCTCCGGGGCCCACACGCTGGGATTCTCGCACTGCTCAAGATTCGCCAACAGGATACACAATTTCAGCCCAAAAGACGTAGTGGACCCGAGCCTGGACAGAGCGTACGCGGCACAGCTGCAGCAGATGTGCCCGAGAAATGTAGACCCCCAGGTGGCCATCAACATGGACCCCATAACTCCTAGAAAATTCGACAACGTCTACTTCTCGAATCTCCGGGCGGGGAAAGGGCTCTTCACTTCGGACCAGGTTCTGTTCACCGACTCCCGGTCCAATCCCACGGTGAATAAGTTGGCCCAGAGCCCATCCGAGTTCAACACTGCATTCGCCGCTGCCATGACGAAACTAGGCCGGGTCGGGGTGAAGAGCGGGTCGAACGGCAACATTCGTCGTGATTGCAGCGTCTTCAATTGA 990 54.55 MGRLSLLLVLSLSLNFFLFISPSSAQLRVGFYSNICPDVEKLVRNVVTTKFQQTFVTVPATLRLFFHDCFVQGCDASVVIASTGGNKAEKDHEDNLSLAGDGFDTVVKAKAAVDAVPRCKNRVSCADILALAARDVVFLAGGPSYPVELGRLDGLVSRASDVNGKLPQPTFTLDQLNSLFAGHGLTQEDMIALSGAHTLGFSHCSRFANRIHNFSPKDVVDPSLDRAYAAQLQQMCPRNVDPQVAINMDPITPRKFDNVYFSNLRAGKGLFTSDQVLFTDSRSNPTVNKLAQSPSEFNTAFAAAMTKLGRVGVKSGSNGNIRRDCSVFN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 303810 305033 + Bma028678.1 Bma09g00008 88054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00008 329 PANTHER PEROXIDASE 1 329 - -
Bma09g00008 329 Gene3D - 30 329 - -
Bma09g00008 329 Pfam Peroxidase 44 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Bma09g00008 329 Gene3D Peroxidase, domain 2 167 308 - -
Bma09g00008 329 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Bma09g00008 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 PANTHER - 1 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 SUPERFAMILY Heme-dependent peroxidases 26 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 CDD secretory_peroxidase 26 328 IPR033905 GO:0004601|GO:0042744
Bma09g00008 329 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00008 329 ProSiteProfiles Plant heme peroxidase family profile. 26 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g01137 Bma09g00008 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01137 Bma-Chr3:15128214 Bma09g00008 Bma-Chr9:303810 8.85E-172 dispersed
Bma07g00124 Bma-Chr7:1965507 Bma09g00008 Bma-Chr9:303810 1.24E-09 dispersed
Bma09g00008 Bma-Chr9:303810 Bma13g00585 Bma-Chr13:12757631 8.54E-137 dispersed
Bma09g00008 Bma-Chr9:303810 Bma01g00558 Bma-Chr1:4896111 4.86E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00008 K00430 - qsu:112034026 488.034