Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00014 ATGGATACGTTGTTTAGGTTGGTTAGTTTGCAGTCGGAGCAATCTTACAATTCTAGCAGAACTTCAAGCAGTTCAAGATCTTCCAGACACAACAATAATCTCTACCCCCAGGAAGAAGAAGAATGCTTCAACCTTTTCATGGATGAAGAAGACTTCTCGTCCTCTTCTTCAAAGCAATACAACTATCATAATCAGCCCCACCAATCCACTACCACTACCACTACCAACACCAGCACTCCAACTCCAACTGAATTCTCATTTTCTCCCTCGAATGACCTGAATTTCGAGTTTTCCGGCAAGTGGGCCACCGATATACTTCATGAAACCGGCCGAGCCATTGCGGATAAGAACACCGCGCGCCTGCAGCAACTGATGTGGATGCTCAACGAGCTCAGCTCTCCTTACGGAGACACTGATCAGAAGCTGGCTGCGTATTTTCTGCAAGCTTTGTTCAGCCGGATGACGGATTCCGGCGACCGCTGCTACAGTACGTTAGCCGCTGCGTCGGAGAAAACGTGCTCTTTCGAATCAACGAGGAAGATGGTGCTAAAGTTTCAGGAAGTTAGCCCCTGGACTACTTTCGGCCATGTTTCTTGTAATGGTGCAATAATGGAAGCTTTTGAAGGAGAGGCAAAGCTACACATAATCGACATCAGCAATACGTTTTGTACGCAGTGGCCTACTTTGCTGGAAACAATCGCAACTCGGACCGACGAGACACCGCATCTCCGGCTGACGACAGTGATGGCAGCGAAATCAGGTAGCGGCGGCGGAGGAATACTCGCGAATCAGAAGGTGATGAAGGAAGTAGGTTTAAGAATGGAGAAATTCGCTAGGCTCATGGGGGTGCCTTTCAAATTCAACGCTGTATACCATTCCGGAGACCTTTCCGAACTGAATTTATCGGAATTGGATATAAAAGAGGACGAAGCGATCGCCGTAAATTGCGTAGGAGGATTACACACAGTCCCGGGGGTTAATAACCGGCGAGATATATTAATTTCATTGTTTCGGAGTTTAAGACCGAGGATAATTACGGTGGTTGAAGAAGAAGCCGATTTAGACGTCGGAGTTGAAGGGGTTGATTTTTTAAGAGGGTTTCAAGAATGCGTTCGGTGGTTTAGGGTTTACTTTGAGATGTTGGAAGACAGCTTTGGGAGAACGAGCAACGAGCGGTTGATGCTGGAGCGATTGGCGGGAAAAGCCATCGTCGACCTCGTGGCTTGCTCGCGGGGAGATTCAGTGGAGCAGCGGGAGTCTTCGGTACGGTGGGGTCGACGACTGCATGGGAGTGGGTTGAGTCCGGTGGCGTTCAGCGATGAAGTTTGCGACGACGTACGAGCGCTGTTAAGACGGTACAAAGAAGAGTGGACAATGAAGCAGGAATCAGAGGGCGGCGGGATATTCTTGATGTGGAAGGATCAGCCGGTGGTGTGGGCCAGTGCATGGCGGCCG 1455 49.55 MDTLFRLVSLQSEQSYNSSRTSSSSRSSRHNNNLYPQEEEECFNLFMDEEDFSSSSSKQYNYHNQPHQSTTTTTTNTSTPTPTEFSFSPSNDLNFEFSGKWATDILHETGRAIADKNTARLQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRCYSTLAAASEKTCSFESTRKMVLKFQEVSPWTTFGHVSCNGAIMEAFEGEAKLHIIDISNTFCTQWPTLLETIATRTDETPHLRLTTVMAAKSGSGGGGILANQKVMKEVGLRMEKFARLMGVPFKFNAVYHSGDLSELNLSELDIKEDEAIAVNCVGGLHTVPGVNNRRDILISLFRSLRPRIITVVEEEADLDVGVEGVDFLRGFQECVRWFRVYFEMLEDSFGRTSNERLMLERLAGKAIVDLVACSRGDSVEQRESSVRWGRRLHGSGLSPVAFSDEVCDDVRALLRRYKEEWTMKQESEGGGIFLMWKDQPVVWASAWRP 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 330625 332079 - Bma031494 Bma09g00014 88060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00014 485 MobiDBLite consensus disorder prediction 56 85 - -
Bma09g00014 485 Pfam GRAS domain family 105 484 IPR005202 -
Bma09g00014 485 PANTHER PROTEIN SHORT-ROOT 1 484 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Bma09g00014 485 ProSiteProfiles GRAS family profile. 93 484 IPR005202 -
Bma09g00014 485 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 484 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00091 Bma-Chr5:2970523 Bma09g00014 Bma-Chr9:330625 3.23E-43 dispersed
Bma09g00014 Bma-Chr9:330625 Bma15g01112 Bma-Chr15:44117946 6.95E-141 dispersed
Bma15g00320 Bma-Chr15:3063269 Bma09g00014 Bma-Chr9:330625 8.34E-45 dispersed
Bma09g00014 Bma-Chr9:330625 Bma09g00015 Bma-Chr9:352849 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57815 PF03514 GRAS 1.80E-102 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00014 - - jre:109002462 705.286